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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170156714
CEOJ01007099
273835
Bacteroidota
GTT
Asn
>WENV170157671
CEOJ01081653
456414
Bacteroidota
GAA
Phe
>WENV170156812
CEOJ01014132
452487
Bacteroidota
CCA
Trp
>WENV170157238
CEOJ01045347
452487
Bacteroidota
CCA
Trp
>WENV170157510
CEOJ01066180
452487
Bacteroidota
CCA
Trp
>WENV170157987
CEOJ01110195
452487
Bacteroidota
CCA
Trp
>WENV170157632
CEOJ01077904
285374
Bacteroidota
GTC
Asp
>WENV170157933
CEOJ01105342
272122
Bacteroidota
GTC
Asp
>WENV170158111
CEOJ01116473
655825
Bacteroidota
TTC
Glu
>WENV170157553
CEOJ01069871
31447
Bacteroidota
GGA
Ser
>WENV170157310
CEOJ01051588
241634
Bacteroidota
TGG
Pro
>WENV170157538
CEOJ01068780
241634
Bacteroidota
TGG
Pro
>WENV170156699
CEOJ01006127
278725
Bacteroidota
GTT
Asn
>WENV170157675
CEOJ01081706
272325
Bacteroidota
TGC
Ala
>WENV170156731
CEOJ01008094
240683
Bacteroidota
TGG
Pro
>WENV170157561
CEOJ01070777
275165
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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