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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170156699
CEOJ01006127
309637
Bacteroidota
GTT
Asn
>WENV170156731
CEOJ01008094
272547
Bacteroidota
TGG
Pro
>WENV170156812
CEOJ01014132
512002
Bacteroidota
CCA
Trp
>WENV170157238
CEOJ01045347
512002
Bacteroidota
CCA
Trp
>WENV170157510
CEOJ01066180
512002
Bacteroidota
CCA
Trp
>WENV170157553
CEOJ01069871
35920
Bacteroidota
GGA
Ser
>WENV170157561
CEOJ01070777
309633
Bacteroidota
TGT
Thr
>WENV170157632
CEOJ01077904
306111
Bacteroidota
GTC
Asp
>WENV170157671
CEOJ01081653
514174
Bacteroidota
GAA
Phe
>WENV170157675
CEOJ01081706
310507
Bacteroidota
TGC
Ala
>WENV170157933
CEOJ01105342
308536
Bacteroidota
GTC
Asp
>WENV170157957
CEOJ01107587
99745
Bacteroidota
TGA
Ser
>WENV170157987
CEOJ01110195
512002
Bacteroidota
CCA
Trp
>WENV170158111
CEOJ01116473
734200
Bacteroidota
TTC
Glu
>WENV170158282
CEOJ01175273
272633
Bacteroidota
TAC
Val
>WENV170158409
CEOJ01206826
308543
Bacteroidota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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