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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170235314
CEQL01067096
275457
Gammaproteobacteria
ACG
Arg
>WENV170235315
CEQL01067096
275457
Gammaproteobacteria
ACG
Arg
>WENV170234689
CEQL01003139
270982
Gammaproteobacteria
GAT
Ile
>WENV170234944
CEQL01026712
456706
Gammaproteobacteria
TGT
Thr
>WENV170235516
CEQL01091127
458351
Gammaproteobacteria
TTG
Gln
>WENV170235540
CEQL01094029
780642
Gammaproteobacteria
GCA
Cys
>WENV170236115
CEQL01148099
452332
Gammaproteobacteria
GTG
His
>WENV170235578
CEQL01097715
179960
Gammaproteobacteria
TAG
Leu
>WENV170236359
CEQL01250547
273754
Gammaproteobacteria
GTT
Asn
>WENV170235248
CEQL01059404
452377
Gammaproteobacteria
GTT
Asn
>WENV170236036
CEQL01144100
452377
Gammaproteobacteria
GTT
Asn
>WENV170234894
CEQL01022025
459731
Gammaproteobacteria
GGT
Thr
>WENV170235347
CEQL01071071
459731
Gammaproteobacteria
GGT
Thr
>WENV170236093
CEQL01147254
271613
Gammaproteobacteria
GTC
Asp
>WENV170235579
CEQL01097715
779459
Gammaproteobacteria
CCA
Trp
>WENV170236258
CEQL01186448
276972
Gammaproteobacteria
CCA
Trp
>WENV170235772
CEQL01121494
276372
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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