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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170260479
CEQZ01051218
180489
Alphaproteobacteria
TAG
Leu
>WENV170260515
CEQZ01055685
273805
Alphaproteobacteria
ACG
Arg
>WENV170260244
CEQZ01003039
452884
Alphaproteobacteria
CCA
Trp
>WENV170260361
CEQZ01016839
653534
Alphaproteobacteria
GCC
Gly
>WENV170260255
CEQZ01004136
291540
Alphaproteobacteria
TGG
Pro
>WENV170260342
CEQZ01014665
218119
Alphaproteobacteria
>WENV170260321
CEQZ01012282
479115
Alphaproteobacteria
GTT
Asn
>WENV170260314
CEQZ01010946
655171
Alphaproteobacteria
GGT
Thr
>WENV170260194
CEQZ01000543
299109
Alphaproteobacteria
GAC
Val
>WENV170260498
CEQZ01053598
452894
Alphaproteobacteria
CCA
Trp
>WENV170260366
CEQZ01017154
117253
Alphaproteobacteria
GAG
Leu
>WENV170260456
CEQZ01046137
655363
Alphaproteobacteria
GGT
Thr
>WENV170260335
CEQZ01013626
274131
Alphaproteobacteria
CAT
Met
>WENV170260417
CEQZ01027838
274138
Alphaproteobacteria
CAT
Met
>WENV170260211
CEQZ01001411
113188
Alphaproteobacteria
GAG
Leu
>WENV170260302
CEQZ01008890
46072
Alphaproteobacteria
GCT
Ser
>WENV170260245
CEQZ01003094
46072
Alphaproteobacteria
GCT
Ser
>WENV170260313
CEQZ01010920
655166
Alphaproteobacteria
CAC
Val
>WENV170260412
CEQZ01025235
454512
Alphaproteobacteria
CCA
Trp
>WENV170260332
CEQZ01013415
270796
Alphaproteobacteria
GTC
Asp
>WENV170260519
CEQZ01055965
782365
Alphaproteobacteria
TCC
Gly
>WENV170260375
CEQZ01017978
294262
Alphaproteobacteria
CCT
Arg
>WENV170260352
CEQZ01016143
655822
Alphaproteobacteria
GAC
Val
>WENV170260320
CEQZ01012197
454912
Alphaproteobacteria
GGC
Ala
>WENV170260430
CEQZ01033245
112839
Alphaproteobacteria
CAG
Leu
>WENV170260270
CEQZ01005685
275989
Alphaproteobacteria
CAT
Met
>WENV170260310
CEQZ01010165
295679
Alphaproteobacteria
CGG
Pro
>WENV170260311
CEQZ01010165
295679
Alphaproteobacteria
CGG
Pro
>WENV170260195
CEQZ01000609
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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