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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170329656
CESV01145712
457453
Gammaproteobacteria
TTT
Lys
>WENV170328680
CESV01035366
656944
Gammaproteobacteria
CCT
Arg
>WENV170329249
CESV01092073
270982
Gammaproteobacteria
GAT
Ile
>WENV170330284
CESV01192804
276974
Gammaproteobacteria
GGG
Pro
>WENV170328406
CESV01011604
276971
Gammaproteobacteria
ACG
Arg
>WENV170330332
CESV01193705
276973
Gammaproteobacteria
GAC
Val
>WENV170328445
CESV01014994
271287
Gammaproteobacteria
CAT
Met
>WENV170330124
CESV01187735
278982
Gammaproteobacteria
CCG
Arg
>WENV170328579
CESV01026120
452412
Gammaproteobacteria
GCC
Gly
>WENV170330145
CESV01189019
271460
Gammaproteobacteria
CGG
Pro
>WENV170329435
CESV01115601
456510
Gammaproteobacteria
GGC
Ala
>WENV170328491
CESV01018785
113737
Gammaproteobacteria
CAA
Leu
>WENV170329860
CESV01169567
275658
Gammaproteobacteria
TGG
Pro
>WENV170329484
CESV01121808
781121
Gammaproteobacteria
GCA
Cys
>WENV170330183
CESV01190359
273327
Gammaproteobacteria
ACG
Arg
>WENV170329295
CESV01097776
456709
Gammaproteobacteria
TGC
Ala
>WENV170329428
CESV01113994
459731
Gammaproteobacteria
GGT
Thr
>WENV170329597
CESV01136566
113485
Gammaproteobacteria
CAA
Leu
>WENV170329111
CESV01078727
452881
Gammaproteobacteria
TGT
Thr
>WENV170328497
CESV01019668
276972
Gammaproteobacteria
CCA
Trp
>WENV170328673
CESV01034966
276972
Gammaproteobacteria
CCA
Trp
>WENV170328891
CESV01056878
276972
Gammaproteobacteria
CCA
Trp
>WENV170329004
CESV01067030
276972
Gammaproteobacteria
CCA
Trp
>WENV170330304
CESV01193196
276972
Gammaproteobacteria
CCA
Trp
>WENV170328798
CESV01046865
457459
Gammaproteobacteria
GGC
Ala
>WENV170328382
CESV01009983
453897
Gammaproteobacteria
TAC
Val
>WENV170328850
CESV01052625
276970
Gammaproteobacteria
CCG
Arg
>WENV170328602
CESV01027778
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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