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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV000362
AF415211
340256
Alphaproteobacteria
GAT
Ile
>ENV003927
DQ155376
340256
Alphaproteobacteria
GAT
Ile
>ENV003943
DQ155386
340256
Alphaproteobacteria
GAT
Ile
>ENV000461
AF422569
494846
Alphaproteobacteria
TGC
Ala
>ENV004028
DQ190812
494846
Alphaproteobacteria
TGC
Ala
>ENV002336
AY934043
271417
Alphaproteobacteria
GAT
Ile
>ENV002377
AY934064
271417
Alphaproteobacteria
GAT
Ile
>ENV003031
AY962315
454054
Alphaproteobacteria
TGC
Ala
>ENV000251
AF151277
272172
Alphaproteobacteria
GAT
Ile
>ENV001018
AY458633
272172
Alphaproteobacteria
GAT
Ile
>ENV001704
AY933705
272172
Alphaproteobacteria
GAT
Ile
>ENV001767
AY933739
272172
Alphaproteobacteria
GAT
Ile
>ENV002174
AY933955
272172
Alphaproteobacteria
GAT
Ile
>ENV002225
AY933982
272172
Alphaproteobacteria
GAT
Ile
>ENV002241
AY933990
272172
Alphaproteobacteria
GAT
Ile
>ENV002524
AY934157
272172
Alphaproteobacteria
GAT
Ile
>ENV002693
AY934244
272172
Alphaproteobacteria
GAT
Ile
>ENV002355
AY934052
452339
Alphaproteobacteria
TGC
Ala
>ENV001325
AY713447
287552
Alphaproteobacteria
GAT
Ile
>ENV000459
AF422567
272979
Alphaproteobacteria
GAT
Ile
>ENV000460
AF422568
272979
Alphaproteobacteria
GAT
Ile
>ENV000463
AF422571
272979
Alphaproteobacteria
GAT
Ile
>ENV002397
AY934077
272979
Alphaproteobacteria
GAT
Ile
>ENV002415
AY934088
272979
Alphaproteobacteria
GAT
Ile
>ENV002430
AY934096
272979
Alphaproteobacteria
GAT
Ile
>ENV002436
AY934099
272979
Alphaproteobacteria
GAT
Ile
>ENV000197
AF151250
272979
Alphaproteobacteria
GAT
Ile
>ENV000404
AF422529
272979
Alphaproteobacteria
GAT
Ile
>ENV000407
AF422531
272979
Alphaproteobacteria
GAT
Ile
>ENV000409
AF422533
272979
Alphaproteobacteria
GAT
Ile
>ENV000411
AF422534
272979
Alphaproteobacteria
GAT
Ile
>ENV000416
AF422538
272979
Alphaproteobacteria
GAT
Ile
>ENV000420
AF422541
272979
Alphaproteobacteria
GAT
Ile
>ENV000430
AF422549
272979
Alphaproteobacteria
GAT
Ile
>ENV000432
AF422550
272979
Alphaproteobacteria
GAT
Ile
>ENV000437
AF422553
272979
Alphaproteobacteria
GAT
Ile
>ENV000438
AF422554
272979
Alphaproteobacteria
GAT
Ile
>ENV000443
AF422557
272979
Alphaproteobacteria
GAT
Ile
>ENV000452
AF422562
272979
Alphaproteobacteria
GAT
Ile
>ENV000456
AF422565
272979
Alphaproteobacteria
GAT
Ile
>ENV000087
AB276079
299073
Alphaproteobacteria
GAT
Ile
>ENV000058
AB236005
464759
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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