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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180014104
FPIC01056229
46190
Alphaproteobacteria
GGA
Ser
>WENV180014121
FPIC01059334
653784
Alphaproteobacteria
CAT
Met
>WENV180014111
FPIC01056710
654913
Alphaproteobacteria
GTT
Asn
>WENV180014259
FPIC01118929
271417
Alphaproteobacteria
GAT
Ile
>WENV180014127
FPIC01060558
218119
Alphaproteobacteria
>WENV180013888
FPIC01007296
780104
Alphaproteobacteria
TTG
Gln
>WENV180014131
FPIC01062356
273066
Alphaproteobacteria
GTC
Asp
>WENV180014334
FPIC01176889
468172
Alphaproteobacteria
TGC
Ala
>WENV180014162
FPIC01072008
456891
Alphaproteobacteria
CGT
Thr
>WENV180014167
FPIC01074972
653532
Alphaproteobacteria
GTT
Asn
>WENV180014176
FPIC01076785
114771
Alphaproteobacteria
CAG
Leu
>WENV180013981
FPIC01021395
454430
Alphaproteobacteria
CGC
Ala
>WENV180014045
FPIC01036484
455506
Alphaproteobacteria
CAT
Met
>WENV180014324
FPIC01169101
19958
Alphaproteobacteria
GCT
Ser
>WENV180014132
FPIC01062819
45971
Alphaproteobacteria
GGA
Ser
>WENV180013866
FPIC01005494
654916
Alphaproteobacteria
CCC
Gly
>WENV180014328
FPIC01170961
113126
Alphaproteobacteria
CAG
Leu
>WENV180014129
FPIC01061675
782365
Alphaproteobacteria
TCC
Gly
>WENV180013920
FPIC01010466
653536
Alphaproteobacteria
TTG
Gln
>WENV180014058
FPIC01038840
49776
Alphaproteobacteria
CGA
Ser
>WENV180014087
FPIC01049648
671670
Alphaproteobacteria
CAC
Val
>WENV180014144
FPIC01067793
454914
Alphaproteobacteria
TTT
Lys
>WENV180014298
FPIC01152340
289689
Alphaproteobacteria
TAC
Val
>WENV180014178
FPIC01078186
454428
Alphaproteobacteria
TGC
Ala
>WENV180014073
FPIC01043597
454433
Alphaproteobacteria
TGT
Thr
>WENV180014041
FPIC01035339
274130
Alphaproteobacteria
CGG
Pro
>WENV180014169
FPIC01075205
784639
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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