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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016375
FSUT01000156
204956
Actinomycetota
CAA
Leu
>WENV180016376
FSUT01000184
309852
Actinomycetota
CAT
Met
>WENV180016378
FSUT01000280
879332
Actinomycetota
GCA
Cys
>WENV180016379
FSUT01000391
38478
Actinomycetota
TGA
Ser
>WENV180016383
FSUT01000543
7377
Actinomycetota
>WENV180016386
FSUT01000619
512529
Actinomycetota
CGT
Thr
>WENV180016388
FSUT01000678
879332
Actinomycetota
GCA
Cys
>WENV180016391
FSUT01000776
326835
Actinomycetota
ACG
Arg
>WENV180016392
FSUT01000783
531575
Actinomycetota
CGC
Ala
>WENV180016393
FSUT01000787
514540
Actinomycetota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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