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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170639352
JFJP01002028
780573
Betaproteobacteria
TCC
Gly
>WENV170639662
JFJP01005704
667715
Betaproteobacteria
CAC
Val
>WENV170639617
JFJP01005396
454453
Betaproteobacteria
GCC
Gly
>WENV170639681
JFJP01005872
454453
Betaproteobacteria
GCC
Gly
>WENV170639693
JFJP01005958
454453
Betaproteobacteria
GCC
Gly
>WENV170639694
JFJP01005958
454453
Betaproteobacteria
GCC
Gly
>WENV170639697
JFJP01005966
454453
Betaproteobacteria
GCC
Gly
>WENV170639700
JFJP01005985
454453
Betaproteobacteria
GCC
Gly
>WENV170639701
JFJP01005985
454453
Betaproteobacteria
GCC
Gly
>WENV170639723
JFJP01006294
454453
Betaproteobacteria
GCC
Gly
>WENV170639766
JFJP01007243
454453
Betaproteobacteria
GCC
Gly
>WENV170639805
JFJP01008645
454453
Betaproteobacteria
GCC
Gly
>WENV170639864
JFJP01010519
154091
Betaproteobacteria
GTA
Tyr
>WENV170639751
JFJP01006829
286012
Betaproteobacteria
CAT
Met
>WENV170639788
JFJP01007890
286012
Betaproteobacteria
CAT
Met
>WENV170639714
JFJP01006216
276754
Betaproteobacteria
CAT
Met
>WENV170639787
JFJP01007793
276754
Betaproteobacteria
CAT
Met
>WENV170639798
JFJP01008141
508704
Betaproteobacteria
GAA
Phe
>WENV170639846
JFJP01009849
508704
Betaproteobacteria
GAA
Phe
>WENV170639731
JFJP01006384
508704
Betaproteobacteria
GAA
Phe
>WENV170639746
JFJP01006754
508704
Betaproteobacteria
GAA
Phe
>WENV170639296
JFJP01001773
452923
Betaproteobacteria
TTT
Lys
>WENV170639640
JFJP01005546
457359
Betaproteobacteria
TTT
Lys
>WENV170639774
JFJP01007486
457359
Betaproteobacteria
TTT
Lys
>WENV170639852
JFJP01010144
457359
Betaproteobacteria
TTT
Lys
>WENV170639635
JFJP01005507
663644
Betaproteobacteria
CAC
Val
>WENV170639646
JFJP01005604
663644
Betaproteobacteria
CAC
Val
>WENV170639874
JFJP01010830
454227
Betaproteobacteria
GTG
His
>WENV170639280
JFJP01001743
780080
Betaproteobacteria
GCA
Cys
>WENV170639456
JFJP01002959
282859
Betaproteobacteria
TGG
Pro
>WENV170639374
JFJP01002140
112709
Betaproteobacteria
TAG
Leu
>WENV170639418
JFJP01002524
455929
Betaproteobacteria
GCC
Gly
>WENV170639432
JFJP01002658
455929
Betaproteobacteria
GCC
Gly
>WENV170639498
JFJP01003615
455929
Betaproteobacteria
GCC
Gly
>WENV170639508
JFJP01003807
455929
Betaproteobacteria
GCC
Gly
>WENV170639551
JFJP01004348
455929
Betaproteobacteria
GCC
Gly
>WENV170639553
JFJP01004348
455929
Betaproteobacteria
GCC
Gly
>WENV170642137
JFJP01039150
455929
Betaproteobacteria
GCC
Gly
>WENV170639663
JFJP01005707
456398
Betaproteobacteria
GAA
Phe
>WENV170639765
JFJP01007213
456398
Betaproteobacteria
GAA
Phe
>WENV170639830
JFJP01009397
456398
Betaproteobacteria
GAA
Phe
>WENV170639767
JFJP01007322
780146
Betaproteobacteria
CCC
Gly
>WENV170639441
JFJP01002802
276282
Betaproteobacteria
CAT
Met
>WENV170639359
JFJP01002045
780079
Betaproteobacteria
TCC
Gly
>WENV170639398
JFJP01002384
780079
Betaproteobacteria
TCC
Gly
>WENV170639518
JFJP01003881
780079
Betaproteobacteria
TCC
Gly
>WENV170639315
JFJP01001851
455934
Betaproteobacteria
TTC
Glu
>WENV170639655
JFJP01005676
487621
Betaproteobacteria
GCC
Gly
>WENV170639288
JFJP01001759
465080
Betaproteobacteria
GGC
Ala
>WENV170639545
JFJP01004283
465080
Betaproteobacteria
GGC
Ala
>WENV170639819
JFJP01008968
465080
Betaproteobacteria
GGC
Ala
>WENV170639324
JFJP01001899
454342
Betaproteobacteria
CCA
Trp
>WENV170639847
JFJP01009935
470060
Betaproteobacteria
TGT
Thr
>WENV170639430
JFJP01002632
452595
Betaproteobacteria
GTT
Asn
>WENV170639465
JFJP01003051
452595
Betaproteobacteria
GTT
Asn
>WENV170639507
JFJP01003807
452595
Betaproteobacteria
GTT
Asn
>WENV170639677
JFJP01005862
452595
Betaproteobacteria
GTT
Asn
>WENV170639808
JFJP01008699
452595
Betaproteobacteria
GTT
Asn
>WENV170639593
JFJP01005291
487572
Betaproteobacteria
CCG
Arg
>WENV170639724
JFJP01006296
273481
Betaproteobacteria
GGG
Pro
>WENV170639764
JFJP01007185
273481
Betaproteobacteria
GGG
Pro
>WENV170639840
JFJP01009661
273481
Betaproteobacteria
GGG
Pro
>WENV170639579
JFJP01005014
282068
Betaproteobacteria
TTG
Gln
>WENV170639619
JFJP01005406
274850
Betaproteobacteria
CGG
Pro
>WENV170639633
JFJP01005500
274850
Betaproteobacteria
CGG
Pro
>WENV170639745
JFJP01006723
274850
Betaproteobacteria
CGG
Pro
>WENV170639664
JFJP01005743
283584
Betaproteobacteria
CAT
Met
>WENV170639409
JFJP01002458
454347
Betaproteobacteria
GTG
His
>WENV170639747
JFJP01006774
454455
Betaproteobacteria
CCG
Arg
>WENV170639784
JFJP01007744
454455
Betaproteobacteria
CCG
Arg
>WENV170639786
JFJP01007788
454455
Betaproteobacteria
CCG
Arg
>WENV170639793
JFJP01008013
454455
Betaproteobacteria
CCG
Arg
>WENV170639839
JFJP01009616
454455
Betaproteobacteria
CCG
Arg
>WENV170639761
JFJP01007154
456400
Betaproteobacteria
TTC
Glu
>WENV170639743
JFJP01006656
273483
Betaproteobacteria
ACG
Arg
>WENV170639325
JFJP01001899
653938
Betaproteobacteria
CAC
Val
>WENV170639736
JFJP01006463
780144
Betaproteobacteria
GCA
Cys
>WENV170639378
JFJP01002159
457604
Betaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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