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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656005
JTFN01114620
480504
Betaproteobacteria
TTT
Lys
>WENV170655258
JTFN01015440
46024
Betaproteobacteria
TGA
Ser
>WENV170655493
JTFN01038317
46024
Betaproteobacteria
TGA
Ser
>WENV170655047
JTFN01002742
273688
Betaproteobacteria
GAT
Ile
>WENV170655598
JTFN01049901
273688
Betaproteobacteria
GAT
Ile
>WENV170655087
JTFN01004539
655110
Betaproteobacteria
CCT
Arg
>WENV170655506
JTFN01039558
655110
Betaproteobacteria
CCT
Arg
>WENV170655116
JTFN01005683
30508
Betaproteobacteria
GGA
Ser
>WENV170655644
JTFN01054307
30508
Betaproteobacteria
GGA
Ser
>WENV170655523
JTFN01041120
298558
Betaproteobacteria
TGG
Pro
>WENV170655220
JTFN01012286
180273
Betaproteobacteria
TAG
Leu
>WENV170655238
JTFN01013767
180273
Betaproteobacteria
TAG
Leu
>WENV170655318
JTFN01020484
180273
Betaproteobacteria
TAG
Leu
>WENV170655192
JTFN01010904
273687
Betaproteobacteria
CAT
Met
>WENV170655254
JTFN01014690
273687
Betaproteobacteria
CAT
Met
>WENV170655647
JTFN01054494
273687
Betaproteobacteria
CAT
Met
>WENV170655934
JTFN01097679
273687
Betaproteobacteria
CAT
Met
>WENV170655040
JTFN01002462
273693
Betaproteobacteria
GAC
Val
>WENV170655558
JTFN01045290
273693
Betaproteobacteria
GAC
Val
>WENV170655055
JTFN01003142
12363
Betaproteobacteria
GCT
Ser
>WENV170655583
JTFN01048262
12363
Betaproteobacteria
GCT
Ser
>WENV170655809
JTFN01076705
454803
Betaproteobacteria
TTT
Lys
>WENV170655494
JTFN01038317
154011
Betaproteobacteria
TAA
Leu
>WENV170655350
JTFN01023630
780207
Betaproteobacteria
GCA
Cys
>WENV170655419
JTFN01030640
780207
Betaproteobacteria
GCA
Cys
>WENV170655420
JTFN01030641
780207
Betaproteobacteria
GCA
Cys
>WENV170655727
JTFN01063872
780207
Betaproteobacteria
GCA
Cys
>WENV170655593
JTFN01049401
180461
Betaproteobacteria
GAG
Leu
>WENV170655616
JTFN01052797
180461
Betaproteobacteria
GAG
Leu
>WENV170655683
JTFN01057306
180461
Betaproteobacteria
GAG
Leu
>WENV170655139
JTFN01007389
780208
Betaproteobacteria
CCC
Gly
>WENV170655776
JTFN01072400
780208
Betaproteobacteria
CCC
Gly
>WENV170655815
JTFN01079006
180620
Betaproteobacteria
GAG
Leu
>WENV170655828
JTFN01080874
452202
Betaproteobacteria
TAC
Val
>WENV170655670
JTFN01056535
454802
Betaproteobacteria
CCA
Trp
>WENV170655741
JTFN01066235
454802
Betaproteobacteria
CCA
Trp
>WENV170655863
JTFN01087732
454802
Betaproteobacteria
CCA
Trp
>WENV170654985
JTFN01001123
655109
Betaproteobacteria
CAC
Val
>WENV170655354
JTFN01024449
655109
Betaproteobacteria
CAC
Val
>WENV170656104
JTFN01135111
655108
Betaproteobacteria
CCG
Arg
>WENV170655362
JTFN01025389
655108
Betaproteobacteria
CCG
Arg
>WENV170655814
JTFN01078926
655108
Betaproteobacteria
CCG
Arg
>WENV170655964
JTFN01104004
655108
Betaproteobacteria
CCG
Arg
>WENV170656004
JTFN01114509
454464
Betaproteobacteria
TAC
Val
>WENV170654982
JTFN01001043
273691
Betaproteobacteria
ACG
Arg
>WENV170655650
JTFN01054567
273691
Betaproteobacteria
ACG
Arg
>WENV170655715
JTFN01061509
273691
Betaproteobacteria
ACG
Arg
>WENV170655848
JTFN01083476
273691
Betaproteobacteria
ACG
Arg
>WENV170655663
JTFN01055764
458878
Betaproteobacteria
TTC
Glu
>WENV170655937
JTFN01098408
458878
Betaproteobacteria
TTC
Glu
>WENV170655940
JTFN01098408
458878
Betaproteobacteria
TTC
Glu
>WENV170655972
JTFN01105154
458878
Betaproteobacteria
TTC
Glu
>WENV170655415
JTFN01030019
46023
Betaproteobacteria
CGA
Ser
>WENV170655560
JTFN01045658
46023
Betaproteobacteria
CGA
Ser
>WENV170655553
JTFN01044465
112785
Betaproteobacteria
GTA
Tyr
>WENV170655850
JTFN01083765
180463
Betaproteobacteria
CAG
Leu
>WENV170655469
JTFN01035531
180463
Betaproteobacteria
CAG
Leu
>WENV170655521
JTFN01041094
180463
Betaproteobacteria
CAG
Leu
>WENV170655783
JTFN01073368
180463
Betaproteobacteria
CAG
Leu
>WENV170655467
JTFN01035101
273686
Betaproteobacteria
TTG
Gln
>WENV170655869
JTFN01088981
273686
Betaproteobacteria
TTG
Gln
>WENV170655133
JTFN01007028
454801
Betaproteobacteria
TGT
Thr
>WENV170655020
JTFN01002163
454799
Betaproteobacteria
CGT
Thr
>WENV170655021
JTFN01002239
454799
Betaproteobacteria
CGT
Thr
>WENV170655272
JTFN01016597
454799
Betaproteobacteria
CGT
Thr
>WENV170655529
JTFN01041949
454799
Betaproteobacteria
CGT
Thr
>WENV170655045
JTFN01002686
454800
Betaproteobacteria
CTT
Lys
>WENV170655849
JTFN01083607
454800
Betaproteobacteria
CTT
Lys
>WENV170655235
JTFN01013681
273689
Betaproteobacteria
TCT
Arg
>WENV170655295
JTFN01018721
273689
Betaproteobacteria
TCT
Arg
>WENV170655066
JTFN01003978
454798
Betaproteobacteria
GTT
Asn
>WENV170655278
JTFN01016766
454798
Betaproteobacteria
GTT
Asn
>WENV170655372
JTFN01026150
454798
Betaproteobacteria
GTT
Asn
>WENV170655471
JTFN01035688
454798
Betaproteobacteria
GTT
Asn
>WENV170655497
JTFN01038727
454798
Betaproteobacteria
GTT
Asn
>WENV170654959
JTFN01000255
180462
Betaproteobacteria
CAG
Leu
>WENV170655554
JTFN01044465
780210
Betaproteobacteria
TCC
Gly
>WENV170655656
JTFN01055330
780210
Betaproteobacteria
TCC
Gly
>WENV170655852
JTFN01084994
780210
Betaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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