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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170658110
JTFP01055677
655530
Betaproteobacteria
GGT
Thr
>WENV170658354
JTFP01092113
655530
Betaproteobacteria
GGT
Thr
>WENV170658446
JTFP01113623
242196
Betaproteobacteria
TGG
Pro
>WENV170658256
JTFP01076471
180273
Betaproteobacteria
TAG
Leu
>WENV170658211
JTFP01068280
455720
Betaproteobacteria
TGC
Ala
>WENV170658394
JTFP01102086
455720
Betaproteobacteria
TGC
Ala
>WENV170658585
JTFP01152627
455720
Betaproteobacteria
TGC
Ala
>WENV170657785
JTFP01019440
780208
Betaproteobacteria
CCC
Gly
>WENV170658057
JTFP01049753
46122
Betaproteobacteria
CGA
Ser
>WENV170658097
JTFP01054716
274554
Betaproteobacteria
TTG
Gln
>WENV170658474
JTFP01118311
274554
Betaproteobacteria
TTG
Gln
>WENV170657620
JTFP01005317
112785
Betaproteobacteria
GTA
Tyr
>WENV170658337
JTFP01089344
487621
Betaproteobacteria
GCC
Gly
>WENV170658419
JTFP01109146
8292
Betaproteobacteria
GCT
Ser
>WENV170658292
JTFP01082927
273686
Betaproteobacteria
TTG
Gln
>WENV170657999
JTFP01042353
455351
Betaproteobacteria
TAC
Val
>WENV170657974
JTFP01038805
454799
Betaproteobacteria
CGT
Thr
>WENV170658633
JTFP01166056
454800
Betaproteobacteria
CTT
Lys
>WENV170658020
JTFP01045606
454798
Betaproteobacteria
GTT
Asn
>WENV170657621
JTFP01005317
780210
Betaproteobacteria
TCC
Gly
>WENV170657818
JTFP01023039
289669
Betaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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