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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170699019
LGVF01462463
277479
Gammaproteobacteria
CAT
Met
>WENV170696804
LGVF01051103
284350
Gammaproteobacteria
TCT
Arg
>WENV170696225
LGVF01004498
270982
Gammaproteobacteria
GAT
Ile
>WENV170696259
LGVF01008062
270982
Gammaproteobacteria
GAT
Ile
>WENV170696261
LGVF01008371
270982
Gammaproteobacteria
GAT
Ile
>WENV170696936
LGVF01062589
270982
Gammaproteobacteria
GAT
Ile
>WENV170697528
LGVF01151550
270982
Gammaproteobacteria
GAT
Ile
>WENV170698336
LGVF01315335
270982
Gammaproteobacteria
GAT
Ile
>WENV170696241
LGVF01006752
455942
Gammaproteobacteria
GCC
Gly
>WENV170699906
LGVF01679383
655386
Gammaproteobacteria
TTG
Gln
>WENV170699944
LGVF01684496
12379
Gammaproteobacteria
GCT
Ser
>WENV170699942
LGVF01683175
273847
Gammaproteobacteria
CCT
Arg
>WENV170699920
LGVF01680600
273857
Gammaproteobacteria
TGG
Pro
>WENV170699945
LGVF01684496
274209
Gammaproteobacteria
ACG
Arg
>WENV170699917
LGVF01680271
655197
Gammaproteobacteria
TTG
Gln
>WENV170699959
LGVF01688863
218101
Gammaproteobacteria
GTA
Tyr
>WENV170699943
LGVF01683336
30520
Gammaproteobacteria
TGA
Ser
>WENV170696226
LGVF01004498
452579
Gammaproteobacteria
TGC
Ala
>WENV170696262
LGVF01008371
452579
Gammaproteobacteria
TGC
Ala
>WENV170696937
LGVF01062589
452579
Gammaproteobacteria
TGC
Ala
>WENV170697529
LGVF01151550
452579
Gammaproteobacteria
TGC
Ala
>WENV170699910
LGVF01680041
180498
Gammaproteobacteria
TAG
Leu
>WENV170699151
LGVF01489691
780101
Gammaproteobacteria
TCC
Gly
>WENV170696496
LGVF01021898
459731
Gammaproteobacteria
GGT
Thr
>WENV170699904
LGVF01679258
780241
Gammaproteobacteria
GCA
Cys
>WENV170699533
LGVF01577056
463813
Gammaproteobacteria
TTT
Lys
>WENV170699947
LGVF01685299
454969
Gammaproteobacteria
GTT
Asn
>WENV170699152
LGVF01489691
655194
Gammaproteobacteria
GGT
Thr
>WENV170699923
LGVF01680831
274204
Gammaproteobacteria
GGG
Pro
>WENV170699930
LGVF01681669
454964
Gammaproteobacteria
TTC
Glu
>WENV170699338
LGVF01529073
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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