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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180040071
LLBY010365285
281747
Alphaproteobacteria
CCT
Arg
>WENV180038722
LLBY010003616
180320
Alphaproteobacteria
TAG
Leu
>WENV180039203
LLBY010036551
275909
Alphaproteobacteria
CCA
Trp
>WENV180039242
LLBY010041095
299119
Alphaproteobacteria
ACG
Arg
>WENV180038590
LLBY010000395
654792
Alphaproteobacteria
GGT
Thr
>WENV180039484
LLBY010079768
45928
Alphaproteobacteria
TGA
Ser
>WENV180039556
LLBY010091149
45928
Alphaproteobacteria
TGA
Ser
>WENV180038887
LLBY010010410
653931
Alphaproteobacteria
GTT
Asn
>WENV180040325
LLBY010681890
654962
Alphaproteobacteria
TTG
Gln
>WENV180039706
LLBY010131934
180319
Alphaproteobacteria
CAA
Leu
>WENV180039478
LLBY010077497
273909
Alphaproteobacteria
TCT
Arg
>WENV180039001
LLBY010018804
452755
Alphaproteobacteria
TAC
Val
>WENV180039200
LLBY010036231
452755
Alphaproteobacteria
TAC
Val
>WENV180038932
LLBY010013759
273160
Alphaproteobacteria
ACG
Arg
>WENV180038970
LLBY010016799
654791
Alphaproteobacteria
CTC
Glu
>WENV180039440
LLBY010070671
780298
Alphaproteobacteria
CTG
Gln
>WENV180039171
LLBY010031803
275205
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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