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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170786358
MDSV01002089
273797
Alphaproteobacteria
GGG
Pro
>WENV170791849
MDSV01089842
655421
Alphaproteobacteria
GGT
Thr
>WENV170787075
MDSV01012763
452884
Alphaproteobacteria
CCA
Trp
>WENV170791315
MDSV01080798
452884
Alphaproteobacteria
CCA
Trp
>WENV170797245
MDSV01177448
452884
Alphaproteobacteria
CCA
Trp
>WENV170801046
MDSV01240179
452884
Alphaproteobacteria
CCA
Trp
>WENV170793566
MDSV01118460
46190
Alphaproteobacteria
GGA
Ser
>WENV170789685
MDSV01053839
30553
Alphaproteobacteria
GGA
Ser
>WENV170787985
MDSV01025962
218119
Alphaproteobacteria
>WENV170794701
MDSV01136292
451759
Alphaproteobacteria
TTT
Lys
>WENV170800562
MDSV01232348
451759
Alphaproteobacteria
TTT
Lys
>WENV170797309
MDSV01178265
452895
Alphaproteobacteria
TGC
Ala
>WENV170800816
MDSV01236593
274224
Alphaproteobacteria
CAT
Met
>WENV170800695
MDSV01234538
49736
Alphaproteobacteria
TGA
Ser
>WENV170794581
MDSV01134348
653532
Alphaproteobacteria
GTT
Asn
>WENV170798948
MDSV01205157
653532
Alphaproteobacteria
GTT
Asn
>WENV170786254
MDSV01000136
653532
Alphaproteobacteria
GTT
Asn
>WENV170787168
MDSV01014392
654987
Alphaproteobacteria
GAC
Val
>WENV170791824
MDSV01089430
19999
Alphaproteobacteria
GCT
Ser
>WENV170801120
MDSV01241258
456498
Alphaproteobacteria
CAT
Met
>WENV170799781
MDSV01219321
455172
Alphaproteobacteria
GGC
Ala
>WENV170789913
MDSV01057515
779636
Alphaproteobacteria
CTG
Gln
>WENV170797422
MDSV01180114
454059
Alphaproteobacteria
TTT
Lys
>WENV170798217
MDSV01193201
454059
Alphaproteobacteria
TTT
Lys
>WENV170786956
MDSV01011010
454059
Alphaproteobacteria
TTT
Lys
>WENV170791539
MDSV01084899
180749
Alphaproteobacteria
TAG
Leu
>WENV170786305
MDSV01001072
463649
Alphaproteobacteria
GAA
Phe
>WENV170793473
MDSV01116826
655402
Alphaproteobacteria
GTT
Asn
>WENV170799395
MDSV01212922
454512
Alphaproteobacteria
CCA
Trp
>WENV170794402
MDSV01131655
271361
Alphaproteobacteria
CAT
Met
>WENV170794841
MDSV01138471
273603
Alphaproteobacteria
TGG
Pro
>WENV170797150
MDSV01175976
273603
Alphaproteobacteria
TGG
Pro
>WENV170797185
MDSV01176774
273603
Alphaproteobacteria
TGG
Pro
>WENV170794476
MDSV01132781
655271
Alphaproteobacteria
GGT
Thr
>WENV170787478
MDSV01019258
655271
Alphaproteobacteria
GGT
Thr
>WENV170791874
MDSV01090264
274133
Alphaproteobacteria
ACG
Arg
>WENV170790919
MDSV01073667
271956
Alphaproteobacteria
CAT
Met
>WENV170798020
MDSV01190038
780346
Alphaproteobacteria
CTG
Gln
>WENV170794497
MDSV01133023
270897
Alphaproteobacteria
CCT
Arg
>WENV170789306
MDSV01048222
113889
Alphaproteobacteria
CAG
Leu
>WENV170788248
MDSV01030462
780582
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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