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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170794402
MDSV01131655
306405
Alphaproteobacteria
CAT
Met
>WENV170798530
MDSV01198299
767825
Alphaproteobacteria
TTG
Gln
>WENV170800695
MDSV01234538
53079
Alphaproteobacteria
TGA
Ser
>WENV170790919
MDSV01073667
311755
Alphaproteobacteria
>WENV170796271
MDSV01161873
215846
Alphaproteobacteria
GTA
Tyr
>WENV170791824
MDSV01089430
23693
Alphaproteobacteria
GCT
Ser
>WENV170793731
MDSV01121305
311588
Alphaproteobacteria
CAT
Met
>WENV170795174
MDSV01143936
311588
Alphaproteobacteria
CAT
Met
>WENV170795808
MDSV01154354
311588
Alphaproteobacteria
CAT
Met
>WENV170798720
MDSV01201190
311588
Alphaproteobacteria
CAT
Met
>WENV170799402
MDSV01213018
311588
Alphaproteobacteria
CAT
Met
>WENV170801295
MDSV01244516
311588
Alphaproteobacteria
CAT
Met
>WENV170787010
MDSV01011694
311588
Alphaproteobacteria
CAT
Met
>WENV170790807
MDSV01072129
311588
Alphaproteobacteria
CAT
Met
>WENV170793566
MDSV01118460
53148
Alphaproteobacteria
GGA
Ser
>WENV170793972
MDSV01124744
737487
Alphaproteobacteria
GAA
Phe
>WENV170794585
MDSV01134400
737487
Alphaproteobacteria
GAA
Phe
>WENV170796035
MDSV01158008
737487
Alphaproteobacteria
GAA
Phe
>WENV170786360
MDSV01002167
737487
Alphaproteobacteria
GAA
Phe
>WENV170801120
MDSV01241258
537090
Alphaproteobacteria
>WENV170789685
MDSV01053839
35742
Alphaproteobacteria
GGA
Ser
>WENV170797422
MDSV01180114
510370
Alphaproteobacteria
TTT
Lys
>WENV170798217
MDSV01193201
510370
Alphaproteobacteria
TTT
Lys
>WENV170786956
MDSV01011010
510370
Alphaproteobacteria
TTT
Lys
>WENV170799782
MDSV01219335
307721
Alphaproteobacteria
TCT
Arg
>WENV170794497
MDSV01133023
310056
Alphaproteobacteria
CCT
Arg
>WENV170798343
MDSV01195217
568168
Alphaproteobacteria
CTT
Lys
>WENV170794311
MDSV01130109
313362
Alphaproteobacteria
CCG
Arg
>WENV170786550
MDSV01005059
313362
Alphaproteobacteria
CCG
Arg
>WENV170797309
MDSV01178265
511322
Alphaproteobacteria
TGC
Ala
>WENV170794987
MDSV01140684
568166
Alphaproteobacteria
CGC
Ala
>WENV170788740
MDSV01038701
518140
Alphaproteobacteria
CCA
Trp
>WENV170794840
MDSV01138471
568169
Alphaproteobacteria
TGT
Thr
>WENV170794841
MDSV01138471
306664
Alphaproteobacteria
TGG
Pro
>WENV170797150
MDSV01175976
306664
Alphaproteobacteria
TGG
Pro
>WENV170797185
MDSV01176774
306664
Alphaproteobacteria
TGG
Pro
>WENV170793473
MDSV01116826
733517
Alphaproteobacteria
GTT
Asn
>WENV170789211
MDSV01046463
359886
Alphaproteobacteria
CCG
Arg
>WENV170789234
MDSV01046957
308525
Alphaproteobacteria
CAT
Met
>WENV170793326
MDSV01114272
308525
Alphaproteobacteria
CAT
Met
>WENV170786682
MDSV01007122
53174
Alphaproteobacteria
CGA
Ser
>WENV170791849
MDSV01089842
733494
Alphaproteobacteria
GGT
Thr
>WENV170800816
MDSV01236593
308243
Alphaproteobacteria
CAT
Met
>WENV170791480
MDSV01083959
872390
Alphaproteobacteria
TCC
Gly
>WENV170787985
MDSV01025962
246980
Alphaproteobacteria
>WENV170794838
MDSV01138471
733497
Alphaproteobacteria
TTC
Glu
>WENV170794839
MDSV01138471
733497
Alphaproteobacteria
TTC
Glu
>WENV170798020
MDSV01190038
871847
Alphaproteobacteria
CTG
Gln
>WENV170797245
MDSV01177448
509469
Alphaproteobacteria
CCA
Trp
>WENV170801046
MDSV01240179
509469
Alphaproteobacteria
CCA
Trp
>WENV170787075
MDSV01012763
509469
Alphaproteobacteria
CCA
Trp
>WENV170791315
MDSV01080798
509469
Alphaproteobacteria
CCA
Trp
>WENV170787168
MDSV01014392
732751
Alphaproteobacteria
GAC
Val
>WENV170789329
MDSV01048532
521814
Alphaproteobacteria
GGC
Ala
>WENV170790302
MDSV01064107
743698
Alphaproteobacteria
GTT
Asn
>WENV170791539
MDSV01084899
205153
Alphaproteobacteria
TAG
Leu
>WENV170789895
MDSV01057196
314397
Alphaproteobacteria
GTC
Asp
>WENV170788683
MDSV01037721
215845
Alphaproteobacteria
TAG
Leu
>WENV170796349
MDSV01162982
128298
Alphaproteobacteria
GAG
Leu
>WENV170796955
MDSV01172279
735797
Alphaproteobacteria
GAC
Val
>WENV170797460
MDSV01180730
735797
Alphaproteobacteria
GAC
Val
>WENV170798263
MDSV01193693
735797
Alphaproteobacteria
GAC
Val
>WENV170798604
MDSV01199455
735797
Alphaproteobacteria
GAC
Val
>WENV170799137
MDSV01208332
735797
Alphaproteobacteria
GAC
Val
>WENV170800605
MDSV01232980
735797
Alphaproteobacteria
GAC
Val
>WENV170801340
MDSV01245122
735797
Alphaproteobacteria
GAC
Val
>WENV170791429
MDSV01082737
735797
Alphaproteobacteria
GAC
Val
>WENV170793370
MDSV01115040
735797
Alphaproteobacteria
GAC
Val
>WENV170800181
MDSV01225805
359887
Alphaproteobacteria
GGG
Pro
>WENV170799781
MDSV01219321
510765
Alphaproteobacteria
GGC
Ala
>WENV170787346
MDSV01017115
739927
Alphaproteobacteria
GTT
Asn
>WENV170794476
MDSV01132781
732495
Alphaproteobacteria
GGT
Thr
>WENV170787478
MDSV01019258
732495
Alphaproteobacteria
GGT
Thr
>WENV170793734
MDSV01121348
54167
Alphaproteobacteria
GCT
Ser
>WENV170796295
MDSV01162267
54167
Alphaproteobacteria
GCT
Ser
>WENV170791874
MDSV01090264
311213
Alphaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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