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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170898265
MDTD01123300
544260
Thermodesulfobacteriota
>WENV170890270
MDTD01007429
135018
Thermodesulfobacteriota
CAG
Leu
>WENV170900612
MDTD01156811
135018
Thermodesulfobacteriota
CAG
Leu
>WENV170901925
MDTD01177896
340526
Thermodesulfobacteriota
CCA
Trp
>WENV170898395
MDTD01125283
340527
Thermodesulfobacteriota
CGG
Pro
>WENV170896167
MDTD01091182
545492
Thermodesulfobacteriota
CTC
Glu
>WENV170903172
MDTD01197600
753098
Thermodesulfobacteriota
CTG
Gln
>WENV170895353
MDTD01078053
544254
Thermodesulfobacteriota
CTT
Lys
>WENV170894383
MDTD01064587
525700
Thermodesulfobacteriota
GAA
Phe
>WENV170894295
MDTD01063471
753671
Thermodesulfobacteriota
GAC
Val
>WENV170896329
MDTD01093894
134781
Thermodesulfobacteriota
GAG
Leu
>WENV170896330
MDTD01093894
134781
Thermodesulfobacteriota
GAG
Leu
>WENV170900975
MDTD01162729
753672
Thermodesulfobacteriota
GCC
Gly
>WENV170901444
MDTD01170735
753672
Thermodesulfobacteriota
GCC
Gly
>WENV170901446
MDTD01170735
753672
Thermodesulfobacteriota
GCC
Gly
>WENV170891261
MDTD01021398
545496
Thermodesulfobacteriota
GGC
Ala
>WENV170892865
MDTD01043965
545496
Thermodesulfobacteriota
GGC
Ala
>WENV170890026
MDTD01003902
534654
Thermodesulfobacteriota
GGT
Thr
>WENV170896361
MDTD01094401
545497
Thermodesulfobacteriota
GGT
Thr
>WENV170896362
MDTD01094401
545497
Thermodesulfobacteriota
GGT
Thr
>WENV170901923
MDTD01177896
178889
Thermodesulfobacteriota
GTA
Tyr
>WENV170900851
MDTD01160475
339332
Thermodesulfobacteriota
GTC
Asp
>WENV170895352
MDTD01078053
545502
Thermodesulfobacteriota
GTT
Asn
>WENV170901924
MDTD01177896
545501
Thermodesulfobacteriota
TCC
Gly
>WENV170897488
MDTD01112286
547691
Thermodesulfobacteriota
TGC
Ala
>WENV170901922
MDTD01177896
545500
Thermodesulfobacteriota
TGT
Thr
>WENV170896166
MDTD01091182
540395
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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