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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180050364
MPLU02132579
275828
Alphaproteobacteria
GTC
Asp
>WENV180050391
MPLU02134873
273797
Alphaproteobacteria
GGG
Pro
>WENV180052162
MPLU02274355
452917
Alphaproteobacteria
TAC
Val
>WENV180051710
MPLU02239646
780326
Alphaproteobacteria
CCC
Gly
>WENV180049059
MPLU02031268
452884
Alphaproteobacteria
CCA
Trp
>WENV180050735
MPLU02164489
46070
Alphaproteobacteria
CGA
Ser
>WENV180051713
MPLU02239837
653534
Alphaproteobacteria
GCC
Gly
>WENV180052475
MPLU02302750
291540
Alphaproteobacteria
TGG
Pro
>WENV180049273
MPLU02048242
218119
Alphaproteobacteria
>WENV180052841
MPLU02329308
653538
Alphaproteobacteria
TTC
Glu
>WENV180052842
MPLU02329308
653538
Alphaproteobacteria
TTC
Glu
>WENV180053112
MPLU02346928
661003
Alphaproteobacteria
GAA
Phe
>WENV180049576
MPLU02070291
780661
Alphaproteobacteria
GCA
Cys
>WENV180052348
MPLU02290434
655359
Alphaproteobacteria
GAC
Val
>WENV180050478
MPLU02142974
154065
Alphaproteobacteria
GAG
Leu
>WENV180049348
MPLU02053092
451742
Alphaproteobacteria
GGC
Ala
>WENV180051502
MPLU02219633
655394
Alphaproteobacteria
GTT
Asn
>WENV180051533
MPLU02221745
274131
Alphaproteobacteria
CAT
Met
>WENV180049204
MPLU02043031
281955
Alphaproteobacteria
CAT
Met
>WENV180050405
MPLU02136419
655358
Alphaproteobacteria
TTG
Gln
>WENV180051222
MPLU02198688
46072
Alphaproteobacteria
GCT
Ser
>WENV180053135
MPLU02348736
46222
Alphaproteobacteria
GGA
Ser
>WENV180050363
MPLU02132579
270796
Alphaproteobacteria
GTC
Asp
>WENV180052761
MPLU02323224
154064
Alphaproteobacteria
CAG
Leu
>WENV180053147
MPLU02349411
274133
Alphaproteobacteria
ACG
Arg
>WENV180051982
MPLU02260940
218137
Alphaproteobacteria
TAG
Leu
>WENV180051097
MPLU02188078
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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