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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180102653
OAOZ01002269
273835
Bacteroidota
GTT
Asn
>WENV180102647
OAOZ01002109
653934
Bacteroidota
TTC
Glu
>WENV180102678
OAOZ01004456
456729
Bacteroidota
GAA
Phe
>WENV180102718
OAOZ01007251
456414
Bacteroidota
GAA
Phe
>WENV180102909
OAOZ01048806
281766
Bacteroidota
TCT
Arg
>WENV180102892
OAOZ01044595
655825
Bacteroidota
TTC
Glu
>WENV180102616
OAOZ01000825
273589
Bacteroidota
CAT
Met
>WENV180102681
OAOZ01004686
460269
Bacteroidota
CAT
Met
>WENV180102613
OAOZ01000772
783430
Bacteroidota
GCA
Cys
>WENV180102744
OAOZ01009155
278610
Bacteroidota
GTC
Asp
>WENV180102622
OAOZ01001053
180642
Bacteroidota
TAG
Leu
>WENV180102831
OAOZ01025578
655582
Bacteroidota
GCC
Gly
>WENV180102962
OAOZ01070877
183028
Bacteroidota
TAG
Leu
>WENV180102846
OAOZ01030506
285055
Bacteroidota
TCT
Arg
>WENV180102643
OAOZ01002002
180640
Bacteroidota
GTA
Tyr
>WENV180102759
OAOZ01010864
86958
Bacteroidota
TGA
Ser
>WENV180102994
OAOZ01087877
240659
Bacteroidota
TGG
Pro
>WENV180102908
OAOZ01048806
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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