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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180130976
OATG01001804
154983
Bacteroidota
GTA
Tyr
>WENV180130392
OATG01000135
86857
Bacteroidota
TAA
Leu
>WENV180130241
OATG01000017
779477
Bacteroidota
TTG
Gln
>WENV180131245
OATG01005381
779477
Bacteroidota
TTG
Gln
>WENV180130716
OATG01000703
281406
Bacteroidota
GGC
Ala
>WENV180130758
OATG01000892
270542
Bacteroidota
CAT
Met
>WENV180131080
OATG01002576
270412
Bacteroidota
GTT
Asn
>WENV180131081
OATG01002576
270412
Bacteroidota
GTT
Asn
>WENV180130296
OATG01000044
451354
Bacteroidota
TTT
Lys
>WENV180131024
OATG01002190
451354
Bacteroidota
TTT
Lys
>WENV180130577
OATG01000385
113533
Bacteroidota
CAG
Leu
>WENV180130893
OATG01001381
113533
Bacteroidota
CAG
Leu
>WENV180130409
OATG01000161
779388
Bacteroidota
CTG
Gln
>WENV180130410
OATG01000161
779388
Bacteroidota
CTG
Gln
>WENV180130400
OATG01000143
451478
Bacteroidota
TTT
Lys
>WENV180131191
OATG01004217
451478
Bacteroidota
TTT
Lys
>WENV180130464
OATG01000208
458130
Bacteroidota
TTT
Lys
>WENV180130962
OATG01001749
458130
Bacteroidota
TTT
Lys
>WENV180131219
OATG01004740
458130
Bacteroidota
TTT
Lys
>WENV180130533
OATG01000309
653389
Bacteroidota
GGT
Thr
>WENV180130635
OATG01000487
653389
Bacteroidota
GGT
Thr
>WENV180130888
OATG01001358
658239
Bacteroidota
CTC
Glu
>WENV180131010
OATG01002047
658239
Bacteroidota
CTC
Glu
>WENV180130502
OATG01000257
87355
Bacteroidota
TGA
Ser
>WENV180130794
OATG01000989
87355
Bacteroidota
TGA
Ser
>WENV180130267
OATG01000028
30278
Bacteroidota
GGA
Ser
>WENV180130954
OATG01001707
218000
Bacteroidota
CAG
Leu
>WENV180130467
OATG01000219
270492
Bacteroidota
GTG
His
>WENV180130312
OATG01000056
283437
Bacteroidota
TGT
Thr
>WENV180130785
OATG01000958
283437
Bacteroidota
TGT
Thr
>WENV180131468
OATG01038576
451360
Bacteroidota
CGT
Thr
>WENV180130938
OATG01001598
113008
Bacteroidota
GAG
Leu
>WENV180130225
OATG01000009
458644
Bacteroidota
CCC
Gly
>WENV180130961
OATG01001727
458644
Bacteroidota
CCC
Gly
>WENV180130214
OATG01000004
153684
Bacteroidota
GTA
Tyr
>WENV180130306
OATG01000051
153684
Bacteroidota
GTA
Tyr
>WENV180130942
OATG01001623
153684
Bacteroidota
GTA
Tyr
>WENV180131108
OATG01002811
153684
Bacteroidota
GTA
Tyr
>WENV180131582
OATG01078907
153684
Bacteroidota
GTA
Tyr
>WENV180130473
OATG01000227
783463
Bacteroidota
CTG
Gln
>WENV180130879
OATG01001309
273124
Bacteroidota
GTC
Asp
>WENV180130269
OATG01000029
180313
Bacteroidota
TAG
Leu
>WENV180130405
OATG01000146
180313
Bacteroidota
TAG
Leu
>WENV180130501
OATG01000256
86859
Bacteroidota
TGA
Ser
>WENV180130583
OATG01000390
86859
Bacteroidota
TGA
Ser
>WENV180130624
OATG01000470
86859
Bacteroidota
TGA
Ser
>WENV180131218
OATG01004734
86859
Bacteroidota
TGA
Ser
>WENV180130420
OATG01000169
270514
Bacteroidota
GTT
Asn
>WENV180130421
OATG01000169
270514
Bacteroidota
GTT
Asn
>WENV180130422
OATG01000169
270514
Bacteroidota
GTT
Asn
>WENV180130895
OATG01001382
270514
Bacteroidota
GTT
Asn
>WENV180130417
OATG01000169
451389
Bacteroidota
GCC
Gly
>WENV180130419
OATG01000169
451389
Bacteroidota
GCC
Gly
>WENV180130477
OATG01000236
451389
Bacteroidota
GCC
Gly
>WENV180130711
OATG01000684
451389
Bacteroidota
GCC
Gly
>WENV180130713
OATG01000684
451389
Bacteroidota
GCC
Gly
>WENV180130892
OATG01001381
451389
Bacteroidota
GCC
Gly
>WENV180130468
OATG01000221
179905
Bacteroidota
TAG
Leu
>WENV180130345
OATG01000080
660446
Bacteroidota
CCT
Arg
>WENV180131351
OATG01010647
660446
Bacteroidota
CCT
Arg
>WENV180130278
OATG01000032
270418
Bacteroidota
GGC
Ala
>WENV180130520
OATG01000278
270418
Bacteroidota
GGC
Ala
>WENV180130548
OATG01000338
277204
Bacteroidota
GTC
Asp
>WENV180130549
OATG01000338
277204
Bacteroidota
GTC
Asp
>WENV180130818
OATG01001086
277204
Bacteroidota
GTC
Asp
>WENV180131504
OATG01047778
277204
Bacteroidota
GTC
Asp
>WENV180130268
OATG01000028
240600
Bacteroidota
GGG
Pro
>WENV180130367
OATG01000100
240600
Bacteroidota
GGG
Pro
>WENV180130798
OATG01001014
240600
Bacteroidota
GGG
Pro
>WENV180131118
OATG01002957
240600
Bacteroidota
GGG
Pro
>WENV180130407
OATG01000152
779393
Bacteroidota
TTG
Gln
>WENV180130413
OATG01000165
779393
Bacteroidota
TTG
Gln
>WENV180130423
OATG01000174
270494
Bacteroidota
CGG
Pro
>WENV180130772
OATG01000931
270494
Bacteroidota
CGG
Pro
>WENV180130266
OATG01000028
782347
Bacteroidota
CTG
Gln
>WENV180130384
OATG01000131
270491
Bacteroidota
GGC
Ala
>WENV180130636
OATG01000489
241460
Bacteroidota
TAC
Val
>WENV180130637
OATG01000489
241460
Bacteroidota
TAC
Val
>WENV180131189
OATG01004207
241460
Bacteroidota
TAC
Val
>WENV180131190
OATG01004207
241460
Bacteroidota
TAC
Val
>WENV180130286
OATG01000036
451484
Bacteroidota
CAT
Met
>WENV180130588
OATG01000403
653343
Bacteroidota
CCT
Arg
>WENV180130853
OATG01001172
30567
Bacteroidota
GGA
Ser
>WENV180131002
OATG01002013
30567
Bacteroidota
GGA
Ser
>WENV180130667
OATG01000574
30567
Bacteroidota
GGA
Ser
>WENV180130346
OATG01000080
653388
Bacteroidota
TTC
Glu
>WENV180130790
OATG01000976
463028
Bacteroidota
CAT
Met
>WENV180130589
OATG01000405
653774
Bacteroidota
CAT
Met
>WENV180130672
OATG01000581
653774
Bacteroidota
CAT
Met
>WENV180130994
OATG01001961
653774
Bacteroidota
CAT
Met
>WENV180130532
OATG01000309
153692
Bacteroidota
GTA
Tyr
>WENV180130800
OATG01001017
153692
Bacteroidota
GTA
Tyr
>WENV180130817
OATG01001086
153692
Bacteroidota
GTA
Tyr
>WENV180130911
OATG01001459
153692
Bacteroidota
GTA
Tyr
>WENV180131613
OATG01109613
153692
Bacteroidota
GTA
Tyr
>WENV180130508
OATG01000266
153692
Bacteroidota
GTA
Tyr
>WENV180130298
OATG01000045
270851
Bacteroidota
TCT
Arg
>WENV180131169
OATG01003703
270851
Bacteroidota
TCT
Arg
>WENV180130736
OATG01000784
30277
Bacteroidota
GGA
Ser
>WENV180130470
OATG01000223
653377
Bacteroidota
CTC
Glu
>WENV180131173
OATG01003746
653350
Bacteroidota
GCA
Cys
>WENV180130279
OATG01000032
653350
Bacteroidota
GCA
Cys
>WENV180130411
OATG01000161
653350
Bacteroidota
GCA
Cys
>WENV180130443
OATG01000193
653350
Bacteroidota
GCA
Cys
>WENV180130838
OATG01001148
653350
Bacteroidota
GCA
Cys
>WENV180130913
OATG01001464
653350
Bacteroidota
GCA
Cys
>WENV180131129
OATG01003127
653350
Bacteroidota
GCA
Cys
>WENV180130773
OATG01000931
451452
Bacteroidota
CCA
Trp
>WENV180130506
OATG01000266
270497
Bacteroidota
GTG
His
>WENV180130507
OATG01000266
270497
Bacteroidota
GTG
His
>WENV180130329
OATG01000069
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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