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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180131690
OATH01000031
86857
Bacteroidota
TAA
Leu
>WENV180131681
OATH01000026
779477
Bacteroidota
TTG
Gln
>WENV180132284
OATH01011838
270412
Bacteroidota
GTT
Asn
>WENV180132285
OATH01011910
270412
Bacteroidota
GTT
Asn
>WENV180131961
OATH01000458
451354
Bacteroidota
TTT
Lys
>WENV180132101
OATH01001128
451354
Bacteroidota
TTT
Lys
>WENV180131730
OATH01000055
654770
Bacteroidota
GGT
Thr
>WENV180131673
OATH01000025
113533
Bacteroidota
CAG
Leu
>WENV180131737
OATH01000061
113533
Bacteroidota
CAG
Leu
>WENV180131669
OATH01000024
779388
Bacteroidota
CTG
Gln
>WENV180131670
OATH01000024
779388
Bacteroidota
CTG
Gln
>WENV180131739
OATH01000062
451478
Bacteroidota
TTT
Lys
>WENV180131751
OATH01000072
451478
Bacteroidota
TTT
Lys
>WENV180131686
OATH01000029
30311
Bacteroidota
GGA
Ser
>WENV180131783
OATH01000098
30311
Bacteroidota
GGA
Ser
>WENV180131647
OATH01000009
87355
Bacteroidota
TGA
Ser
>WENV180131886
OATH01000283
87355
Bacteroidota
TGA
Ser
>WENV180131943
OATH01000396
87355
Bacteroidota
TGA
Ser
>WENV180132206
OATH01002605
87355
Bacteroidota
TGA
Ser
>WENV180131990
OATH01000604
30278
Bacteroidota
GGA
Ser
>WENV180131800
OATH01000118
112241
Bacteroidota
CAA
Leu
>WENV180132168
OATH01001933
270492
Bacteroidota
GTG
His
>WENV180131716
OATH01000041
451360
Bacteroidota
CGT
Thr
>WENV180131802
OATH01000123
451360
Bacteroidota
CGT
Thr
>WENV180131720
OATH01000047
458644
Bacteroidota
CCC
Gly
>WENV180131723
OATH01000050
153684
Bacteroidota
GTA
Tyr
>WENV180131924
OATH01000354
153684
Bacteroidota
GTA
Tyr
>WENV180131927
OATH01000359
153684
Bacteroidota
GTA
Tyr
>WENV180132076
OATH01000976
153684
Bacteroidota
GTA
Tyr
>WENV180132243
OATH01003451
153684
Bacteroidota
GTA
Tyr
>WENV180132290
OATH01014122
153684
Bacteroidota
GTA
Tyr
>WENV180131901
OATH01000312
180313
Bacteroidota
TAG
Leu
>WENV180131769
OATH01000089
86859
Bacteroidota
TGA
Ser
>WENV180131789
OATH01000108
86859
Bacteroidota
TGA
Ser
>WENV180131950
OATH01000431
86859
Bacteroidota
TGA
Ser
>WENV180131962
OATH01000469
86859
Bacteroidota
TGA
Ser
>WENV180131698
OATH01000036
270514
Bacteroidota
GTT
Asn
>WENV180131700
OATH01000036
270514
Bacteroidota
GTT
Asn
>WENV180131695
OATH01000036
451389
Bacteroidota
GCC
Gly
>WENV180131697
OATH01000036
451389
Bacteroidota
GCC
Gly
>WENV180131736
OATH01000061
451389
Bacteroidota
GCC
Gly
>WENV180131900
OATH01000309
179905
Bacteroidota
TAG
Leu
>WENV180131643
OATH01000007
660446
Bacteroidota
CCT
Arg
>WENV180131848
OATH01000204
660446
Bacteroidota
CCT
Arg
>WENV180132164
OATH01001874
270418
Bacteroidota
GGC
Ala
>WENV180131863
OATH01000236
277204
Bacteroidota
GTC
Asp
>WENV180131864
OATH01000236
277204
Bacteroidota
GTC
Asp
>WENV180131687
OATH01000029
240600
Bacteroidota
GGG
Pro
>WENV180131765
OATH01000084
240600
Bacteroidota
GGG
Pro
>WENV180132005
OATH01000678
779393
Bacteroidota
TTG
Gln
>WENV180132109
OATH01001234
779393
Bacteroidota
TTG
Gln
>WENV180131676
OATH01000025
270494
Bacteroidota
CGG
Pro
>WENV180131685
OATH01000029
782347
Bacteroidota
CTG
Gln
>WENV180131764
OATH01000084
782347
Bacteroidota
CTG
Gln
>WENV180131876
OATH01000256
270491
Bacteroidota
GGC
Ala
>WENV180131906
OATH01000323
241460
Bacteroidota
TAC
Val
>WENV180131907
OATH01000323
241460
Bacteroidota
TAC
Val
>WENV180131824
OATH01000151
451484
Bacteroidota
CAT
Met
>WENV180131976
OATH01000503
451484
Bacteroidota
CAT
Met
>WENV180131786
OATH01000103
653343
Bacteroidota
CCT
Arg
>WENV180131930
OATH01000371
653343
Bacteroidota
CCT
Arg
>WENV180131653
OATH01000012
30567
Bacteroidota
GGA
Ser
>WENV180131679
OATH01000025
30567
Bacteroidota
GGA
Ser
>WENV180131640
OATH01000007
653388
Bacteroidota
TTC
Glu
>WENV180131641
OATH01000007
653388
Bacteroidota
TTC
Glu
>WENV180131639
OATH01000006
653774
Bacteroidota
CAT
Met
>WENV180131693
OATH01000035
653774
Bacteroidota
CAT
Met
>WENV180131741
OATH01000062
153692
Bacteroidota
GTA
Tyr
>WENV180131825
OATH01000156
153692
Bacteroidota
GTA
Tyr
>WENV180131768
OATH01000088
270851
Bacteroidota
TCT
Arg
>WENV180131928
OATH01000360
270851
Bacteroidota
TCT
Arg
>WENV180131760
OATH01000078
30277
Bacteroidota
GGA
Ser
>WENV180131967
OATH01000489
653377
Bacteroidota
CTC
Glu
>WENV180131671
OATH01000024
653350
Bacteroidota
GCA
Cys
>WENV180131684
OATH01000028
653350
Bacteroidota
GCA
Cys
>WENV180132161
OATH01001721
653350
Bacteroidota
GCA
Cys
>WENV180132166
OATH01001917
653350
Bacteroidota
GCA
Cys
>WENV180132178
OATH01002107
653350
Bacteroidota
GCA
Cys
>WENV180131677
OATH01000025
451452
Bacteroidota
CCA
Trp
>WENV180131909
OATH01000327
270497
Bacteroidota
GTG
His
>WENV180131910
OATH01000327
270497
Bacteroidota
GTG
His
>WENV180131719
OATH01000046
653342
Bacteroidota
CCG
Arg
>WENV180131902
OATH01000316
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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