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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180134293
OATK01000038
270850
Bacteroidota
GGC
Ala
>WENV180134780
OATK01001543
154983
Bacteroidota
GTA
Tyr
>WENV180134276
OATK01000023
86857
Bacteroidota
TAA
Leu
>WENV180134254
OATK01000005
779477
Bacteroidota
TTG
Gln
>WENV180134252
OATK01000004
270542
Bacteroidota
CAT
Met
>WENV180134277
OATK01000023
270412
Bacteroidota
GTT
Asn
>WENV180134278
OATK01000023
270412
Bacteroidota
GTT
Asn
>WENV180134255
OATK01000006
451354
Bacteroidota
TTT
Lys
>WENV180134629
OATK01000714
451354
Bacteroidota
TTT
Lys
>WENV180134926
OATK01002856
451354
Bacteroidota
TTT
Lys
>WENV180134895
OATK01002566
654770
Bacteroidota
GGT
Thr
>WENV180134367
OATK01000104
113533
Bacteroidota
CAG
Leu
>WENV180134987
OATK01003581
779388
Bacteroidota
CTG
Gln
>WENV180134793
OATK01001594
451478
Bacteroidota
TTT
Lys
>WENV180134931
OATK01002911
451478
Bacteroidota
TTT
Lys
>WENV180134285
OATK01000031
779381
Bacteroidota
CTG
Gln
>WENV180134288
OATK01000034
30278
Bacteroidota
GGA
Ser
>WENV180134738
OATK01001219
112241
Bacteroidota
CAA
Leu
>WENV180134313
OATK01000056
270492
Bacteroidota
GTG
His
>WENV180134262
OATK01000009
451360
Bacteroidota
CGT
Thr
>WENV180135303
OATK01018368
458644
Bacteroidota
CCC
Gly
>WENV180134247
OATK01000002
153684
Bacteroidota
GTA
Tyr
>WENV180134349
OATK01000093
153684
Bacteroidota
GTA
Tyr
>WENV180134986
OATK01003562
153684
Bacteroidota
GTA
Tyr
>WENV180134520
OATK01000394
783463
Bacteroidota
CTG
Gln
>WENV180134538
OATK01000455
273124
Bacteroidota
GTC
Asp
>WENV180135056
OATK01004532
180313
Bacteroidota
TAG
Leu
>WENV180134478
OATK01000299
86859
Bacteroidota
TGA
Ser
>WENV180134661
OATK01000783
86859
Bacteroidota
TGA
Ser
>WENV180134476
OATK01000293
270514
Bacteroidota
GTT
Asn
>WENV180134814
OATK01001811
451389
Bacteroidota
GCC
Gly
>WENV180135571
OATK01102579
451389
Bacteroidota
GCC
Gly
>WENV180134393
OATK01000139
179905
Bacteroidota
TAG
Leu
>WENV180134290
OATK01000035
660446
Bacteroidota
CCT
Arg
>WENV180134554
OATK01000490
660446
Bacteroidota
CCT
Arg
>WENV180134497
OATK01000348
277204
Bacteroidota
GTC
Asp
>WENV180134498
OATK01000348
277204
Bacteroidota
GTC
Asp
>WENV180134286
OATK01000031
240600
Bacteroidota
GGG
Pro
>WENV180134289
OATK01000034
240600
Bacteroidota
GGG
Pro
>WENV180134734
OATK01001168
240600
Bacteroidota
GGG
Pro
>WENV180134451
OATK01000235
451454
Bacteroidota
CCC
Gly
>WENV180134355
OATK01000098
779393
Bacteroidota
TTG
Gln
>WENV180135226
OATK01010937
270494
Bacteroidota
CGG
Pro
>WENV180134287
OATK01000034
782347
Bacteroidota
CTG
Gln
>WENV180134345
OATK01000090
270491
Bacteroidota
GGC
Ala
>WENV180134268
OATK01000015
451484
Bacteroidota
CAT
Met
>WENV180134447
OATK01000232
451484
Bacteroidota
CAT
Met
>WENV180134563
OATK01000504
30567
Bacteroidota
GGA
Ser
>WENV180134555
OATK01000490
653388
Bacteroidota
TTC
Glu
>WENV180134556
OATK01000490
653388
Bacteroidota
TTC
Glu
>WENV180134303
OATK01000044
270530
Bacteroidota
CAT
Met
>WENV180134449
OATK01000234
463028
Bacteroidota
CAT
Met
>WENV180134674
OATK01000808
463028
Bacteroidota
CAT
Met
>WENV180134606
OATK01000626
653774
Bacteroidota
CAT
Met
>WENV180134764
OATK01001389
653774
Bacteroidota
CAT
Met
>WENV180135098
OATK01006072
153692
Bacteroidota
GTA
Tyr
>WENV180134402
OATK01000154
270851
Bacteroidota
TCT
Arg
>WENV180134604
OATK01000619
451808
Bacteroidota
CGT
Thr
>WENV180134304
OATK01000044
653565
Bacteroidota
CCT
Arg
>WENV180134263
OATK01000011
30277
Bacteroidota
GGA
Ser
>WENV180134381
OATK01000122
653377
Bacteroidota
CTC
Glu
>WENV180134257
OATK01000006
653350
Bacteroidota
GCA
Cys
>WENV180134455
OATK01000260
653350
Bacteroidota
GCA
Cys
>WENV180134939
OATK01002943
270497
Bacteroidota
GTG
His
>WENV180134518
OATK01000390
653342
Bacteroidota
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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