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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180136491
OATN01000029
451658
Actinomycetota
CCG
Arg
>WENV180136543
OATN01000072
87216
Actinomycetota
CGA
Ser
>WENV180136705
OATN01000447
455014
Actinomycetota
CCG
Arg
>WENV180136625
OATN01000206
451405
Actinomycetota
CTC
Glu
>WENV180136706
OATN01000457
451405
Actinomycetota
CTC
Glu
>WENV180136688
OATN01000361
30527
Actinomycetota
GAG
Leu
>WENV180136597
OATN01000145
270710
Actinomycetota
CAT
Met
>WENV180136532
OATN01000060
451412
Actinomycetota
GTT
Asn
>WENV180136533
OATN01000060
451412
Actinomycetota
GTT
Asn
>WENV180136507
OATN01000037
455012
Actinomycetota
CCT
Arg
>WENV180136717
OATN01000540
451381
Actinomycetota
CGT
Thr
>WENV180136578
OATN01000103
452350
Actinomycetota
CAC
Val
>WENV180136735
OATN01000707
452350
Actinomycetota
CAC
Val
>WENV180136610
OATN01000172
270486
Actinomycetota
CGG
Pro
>WENV180136623
OATN01000198
270486
Actinomycetota
CGG
Pro
>WENV180136556
OATN01000082
451442
Actinomycetota
GGC
Ala
>WENV180136736
OATN01000707
451442
Actinomycetota
GGC
Ala
>WENV180136580
OATN01000109
454262
Actinomycetota
GTT
Asn
>WENV180136611
OATN01000174
454262
Actinomycetota
GTT
Asn
>WENV180136537
OATN01000063
451659
Actinomycetota
CCT
Arg
>WENV180136489
OATN01000027
273894
Actinomycetota
TAC
Val
>WENV180136582
OATN01000113
455013
Actinomycetota
GTG
His
>WENV180136525
OATN01000056
451655
Actinomycetota
CCA
Trp
>WENV180136698
OATN01000392
451655
Actinomycetota
CCA
Trp
>WENV180136694
OATN01000379
271229
Actinomycetota
CAT
Met
>WENV180136449
OATN01000007
451474
Actinomycetota
CAC
Val
>WENV180136494
OATN01000029
451474
Actinomycetota
CAC
Val
>WENV180136448
OATN01000007
653394
Actinomycetota
GAC
Val
>WENV180136493
OATN01000029
653394
Actinomycetota
GAC
Val
>WENV180136622
OATN01000194
87217
Actinomycetota
TGA
Ser
>WENV180136557
OATN01000082
779444
Actinomycetota
TTG
Gln
>WENV180136570
OATN01000098
779444
Actinomycetota
TTG
Gln
>WENV180136700
OATN01000418
153702
Actinomycetota
CAG
Leu
>WENV180136773
OATN01002334
153702
Actinomycetota
CAG
Leu
>WENV180136569
OATN01000096
45685
Actinomycetota
GCT
Ser
>WENV180136599
OATN01000146
217997
Actinomycetota
TAG
Leu
>WENV180136626
OATN01000206
653368
Actinomycetota
CTG
Gln
>WENV180136707
OATN01000457
653368
Actinomycetota
CTG
Gln
>WENV180136530
OATN01000059
270704
Actinomycetota
ACG
Arg
>WENV180136594
OATN01000138
270704
Actinomycetota
ACG
Arg
>WENV180136595
OATN01000138
270704
Actinomycetota
ACG
Arg
>WENV180136447
OATN01000007
779447
Actinomycetota
GCA
Cys
>WENV180136730
OATN01000685
779447
Actinomycetota
GCA
Cys
>WENV180136593
OATN01000136
86870
Actinomycetota
CGA
Ser
>WENV180136573
OATN01000098
270422
Actinomycetota
TGG
Pro
>WENV180136515
OATN01000043
232508
Actinomycetota
TAA
Leu
>WENV180136516
OATN01000043
270417
Actinomycetota
CAA
Leu
>WENV180136535
OATN01000061
270417
Actinomycetota
CAA
Leu
>WENV180136722
OATN01000626
779446
Actinomycetota
CCC
Gly
>WENV180136536
OATN01000061
270703
Actinomycetota
TGG
Pro
>WENV180136488
OATN01000024
270403
Actinomycetota
TGT
Thr
>WENV180136600
OATN01000146
451410
Actinomycetota
CGT
Thr
>WENV180136534
OATN01000061
218122
Actinomycetota
TAA
Leu
>WENV180136592
OATN01000135
86861
Actinomycetota
TGA
Ser
>WENV180136731
OATN01000685
653353
Actinomycetota
GAC
Val
>WENV180136734
OATN01000707
653353
Actinomycetota
GAC
Val
>WENV180136747
OATN01001172
273896
Actinomycetota
CAT
Met
>WENV180136521
OATN01000048
270707
Actinomycetota
GAT
Ile
>WENV180136586
OATN01000118
451469
Actinomycetota
GTG
His
>WENV180136517
OATN01000044
86885
Actinomycetota
GGA
Ser
>WENV180136660
OATN01000242
86885
Actinomycetota
GGA
Ser
>WENV180136598
OATN01000146
451455
Actinomycetota
CGT
Thr
>WENV180136511
OATN01000039
270498
Actinomycetota
TAC
Val
>WENV180136452
OATN01000007
30280
Actinomycetota
GAG
Leu
>WENV180136542
OATN01000072
30526
Actinomycetota
GCT
Ser
>WENV180136574
OATN01000099
779392
Actinomycetota
CCC
Gly
>WENV180136519
OATN01000044
270708
Actinomycetota
CTT
Lys
>WENV180136526
OATN01000056
270708
Actinomycetota
CTT
Lys
>WENV180136523
OATN01000048
270706
Actinomycetota
TGT
Thr
>WENV180136713
OATN01000535
653480
Actinomycetota
TTC
Glu
>WENV180136531
OATN01000059
273895
Actinomycetota
ACG
Arg
>WENV180136522
OATN01000048
451443
Actinomycetota
TGC
Ala
>WENV180136487
OATN01000024
452508
Actinomycetota
TGC
Ala
>WENV180136718
OATN01000540
218123
Actinomycetota
TAG
Leu
>WENV180136670
OATN01000290
270711
Actinomycetota
GGG
Pro
>WENV180136451
OATN01000007
270711
Actinomycetota
GGG
Pro
>WENV180136640
OATN01000235
270705
Actinomycetota
TCT
Arg
>WENV180136669
OATN01000285
270705
Actinomycetota
TCT
Arg
>WENV180136865
OATN01021635
457496
Actinomycetota
GCC
Gly
>WENV180136571
OATN01000098
451657
Actinomycetota
GGC
Ala
>WENV180136572
OATN01000098
451657
Actinomycetota
GGC
Ala
>WENV180136567
OATN01000096
179947
Actinomycetota
GTA
Tyr
>WENV180136693
OATN01000379
179947
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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