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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1015598
SRR023846.127961
180136
Gammaproteobacteria
CAA
Leu
>SRA1016413
SRR023846.487084
180098
Gammaproteobacteria
GTA
Tyr
>SRA1015522
SRR023846.94180
273024
Gammaproteobacteria
CAT
Met
>SRA1015521
SRR023846.94180
153942
Gammaproteobacteria
GAG
Leu
>SRA1016187
SRR023846.389028
46251
Gammaproteobacteria
CGA
Ser
>SRA1015826
SRR023846.216017
270685
Gammaproteobacteria
GTG
His
>SRA1016332
SRR023846.456278
270685
Gammaproteobacteria
GTG
His
>SRA1015647
SRR023846.144547
30385
Gammaproteobacteria
GCT
Ser
>SRA1016376
SRR023846.470861
30385
Gammaproteobacteria
GCT
Ser
>SRA1015815
SRR023846.209747
451547
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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