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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1052267
SRR035098.172800
87226
Actinomycetota
GGA
Ser
>SRA1053013
SRR035098.317956
87226
Actinomycetota
GGA
Ser
>SRA1053194
SRR035098.359300
87226
Actinomycetota
GGA
Ser
>SRA1053289
SRR035098.375421
87226
Actinomycetota
GGA
Ser
>SRA1052653
SRR035098.245277
272485
Actinomycetota
TGG
Pro
>SRA1053121
SRR035098.342665
272485
Actinomycetota
TGG
Pro
>SRA1053135
SRR035098.346170
272485
Actinomycetota
TGG
Pro
>SRA1053535
SRR035098.431862
272485
Actinomycetota
TGG
Pro
>SRA1053876
SRR035098.523865
272485
Actinomycetota
TGG
Pro
>SRA1053900
SRR035098.530883
272485
Actinomycetota
TGG
Pro
>SRA1051940
SRR035098.109838
272594
Actinomycetota
CAT
Met
>SRA1052221
SRR035098.162392
272594
Actinomycetota
CAT
Met
>SRA1052412
SRR035098.197688
272594
Actinomycetota
CAT
Met
>SRA1052765
SRR035098.270353
272594
Actinomycetota
CAT
Met
>SRA1052769
SRR035098.272044
272594
Actinomycetota
CAT
Met
>SRA1053883
SRR035098.525216
272594
Actinomycetota
CAT
Met
>SRA1053894
SRR035098.527775
272594
Actinomycetota
CAT
Met
>SRA1052158
SRR035098.151370
87759
Actinomycetota
GGA
Ser
>SRA1053829
SRR035098.506794
87759
Actinomycetota
GGA
Ser
>SRA1053591
SRR035098.445953
285602
Actinomycetota
GAT
Ile
>SRA1052986
SRR035098.313387
458398
Actinomycetota
CTC
Glu
>SRA1051806
SRR035098.80000
474429
Actinomycetota
TTC
Glu
>SRA1051900
SRR035098.99162
474429
Actinomycetota
TTC
Glu
>SRA1052440
SRR035098.204588
474429
Actinomycetota
TTC
Glu
>SRA1052478
SRR035098.211332
474429
Actinomycetota
TTC
Glu
>SRA1052848
SRR035098.284871
474429
Actinomycetota
TTC
Glu
>SRA1053069
SRR035098.330210
474429
Actinomycetota
TTC
Glu
>SRA1053250
SRR035098.368768
474429
Actinomycetota
TTC
Glu
>SRA1053550
SRR035098.434579
474429
Actinomycetota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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