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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170012751
ASRO01000044
159720
Campylobacterota
GTC
Asp
>WENV170012766
ASRO01000236
369690
Campylobacterota
GTT
Asn
>WENV170012752
ASRO01000048
279160
Campylobacterota
TTT
Lys
>WENV170012769
ASRO01000363
159716
Campylobacterota
>WENV170012758
ASRO01000084
259463
Campylobacterota
CCA
Trp
>WENV170012763
ASRO01000188
18379
Campylobacterota
GCT
Ser
>WENV170012764
ASRO01000188
206828
Campylobacterota
>WENV170012740
ASRO01000003
138954
Campylobacterota
TGG
Pro
>WENV170012772
ASRO01000486
64956
Campylobacterota
TAA
Leu
>WENV170012774
ASRO01000514
41258
Campylobacterota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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