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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV081756
BAAU01000164
235097
Bacteroidota
TTT
Lys
>WENV081912
BAAU01004041
235097
Bacteroidota
TTT
Lys
>WENV081792
BAAU01000457
235102
Bacteroidota
CGT
Thr
>WENV082091
BAAU01019984
58715
Bacteroidota
GAG
Leu
>WENV082090
BAAU01019984
59689
Bacteroidota
CAG
Leu
>WENV081774
BAAU01000411
436206
Bacteroidota
TTG
Gln
>WENV082135
BAAU01023290
20893
Bacteroidota
GGA
Ser
>WENV081749
BAAU01000088
338124
Bacteroidota
CCG
Arg
>WENV081897
BAAU01003363
235203
Bacteroidota
TTT
Lys
>WENV082154
BAAU01025910
338132
Bacteroidota
GCA
Cys
>WENV082013
BAAU01010168
338132
Bacteroidota
GCA
Cys
>WENV081798
BAAU01000532
338132
Bacteroidota
GCA
Cys
>WENV081755
BAAU01000145
193809
Bacteroidota
CAT
Met
>WENV082126
BAAU01022529
58714
Bacteroidota
CAA
Leu
>WENV081847
BAAU01001689
301449
Bacteroidota
CGG
Pro
>WENV081821
BAAU01000885
301449
Bacteroidota
CGG
Pro
>WENV081865
BAAU01002387
144656
Bacteroidota
GTG
His
>WENV081828
BAAU01001097
235207
Bacteroidota
CAT
Met
>WENV082098
BAAU01020886
235207
Bacteroidota
CAT
Met
>WENV081805
BAAU01000639
80607
Bacteroidota
GTA
Tyr
>WENV081772
BAAU01000387
80607
Bacteroidota
GTA
Tyr
>WENV081777
BAAU01000424
113604
Bacteroidota
>WENV081763
BAAU01000192
144590
Bacteroidota
GTT
Asn
>WENV081762
BAAU01000192
144590
Bacteroidota
GTT
Asn
>WENV081771
BAAU01000375
95559
Bacteroidota
TAG
Leu
>WENV081761
BAAU01000178
95559
Bacteroidota
TAG
Leu
>WENV082032
BAAU01011314
419272
Bacteroidota
CTG
Gln
>WENV081742
BAAU01000007
419272
Bacteroidota
CTG
Gln
>WENV082007
BAAU01009371
144655
Bacteroidota
GGC
Ala
>WENV081796
BAAU01000499
144655
Bacteroidota
GGC
Ala
>WENV081945
BAAU01005886
151121
Bacteroidota
CAT
Met
>WENV082080
BAAU01017073
139743
Bacteroidota
GGG
Pro
>WENV081850
BAAU01001777
139743
Bacteroidota
GGG
Pro
>WENV082044
BAAU01012349
147439
Bacteroidota
TCT
Arg
>WENV082062
BAAU01014719
50727
Bacteroidota
TGA
Ser
>WENV081948
BAAU01006015
185921
Bacteroidota
GTC
Asp
>WENV081947
BAAU01006015
185921
Bacteroidota
GTC
Asp
>WENV081943
BAAU01005611
23696
Bacteroidota
GCT
Ser
>WENV081842
BAAU01001581
55270
Bacteroidota
TGA
Ser
>WENV081740
BAAU01000004
55270
Bacteroidota
TGA
Ser
>WENV081797
BAAU01000500
16224
Bacteroidota
GGA
Ser
>WENV081750
BAAU01000093
16220
Bacteroidota
GGA
Ser
>WENV081775
BAAU01000420
338125
Bacteroidota
CCT
Arg
>WENV082089
BAAU01019984
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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