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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028385
CDYE01008763
37213
Bacillota
TGA
Ser
>WENV170028434
CDYE01010112
339890
Bacillota
TTG
Gln
>WENV170028150
CDYE01002434
235154
Bacillota
GTT
Asn
>WENV170028079
CDYE01000221
241441
Bacillota
GCC
Gly
>WENV170028173
CDYE01003016
241441
Bacillota
GCC
Gly
>WENV170028248
CDYE01005817
246023
Bacillota
TGC
Ala
>WENV170028183
CDYE01003503
235137
Bacillota
TGC
Ala
>WENV170028370
CDYE01008486
235137
Bacillota
TGC
Ala
>WENV170028392
CDYE01008960
338143
Bacillota
CTC
Glu
>WENV170028391
CDYE01008960
338143
Bacillota
CTC
Glu
>WENV170028401
CDYE01009308
341763
Bacillota
CTC
Glu
>WENV170028250
CDYE01005817
341763
Bacillota
CTC
Glu
>WENV170028433
CDYE01010112
156937
Bacillota
GTG
His
>WENV170028386
CDYE01008763
10680
Bacillota
GGA
Ser
>WENV170028143
CDYE01002235
59296
Bacillota
AAG
Leu
>WENV170028081
CDYE01000263
59296
Bacillota
AAG
Leu
>WENV170028073
CDYE01000197
59296
Bacillota
AAG
Leu
>WENV170028432
CDYE01010112
144672
Bacillota
TCT
Arg
>WENV170028339
CDYE01007967
144672
Bacillota
TCT
Arg
>WENV170028389
CDYE01008916
338131
Bacillota
GCC
Gly
>WENV170028331
CDYE01007720
338131
Bacillota
GCC
Gly
>WENV170028115
CDYE01001229
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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