This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028067
CDYE01000178
41439
Bacillota
TAA
Leu
>WENV170028073
CDYE01000197
64818
Bacillota
AAG
Leu
>WENV170028081
CDYE01000263
64818
Bacillota
AAG
Leu
>WENV170028082
CDYE01000263
71766
Bacillota
CAG
Leu
>WENV170028089
CDYE01000778
42153
Bacillota
TAA
Leu
>WENV170028107
CDYE01000964
371071
Bacillota
GCC
Gly
>WENV170028115
CDYE01001229
369271
Bacillota
GCC
Gly
>WENV170028119
CDYE01001261
371406
Bacillota
GCA
Cys
>WENV170028143
CDYE01002235
64818
Bacillota
AAG
Leu
>WENV170028144
CDYE01002235
71766
Bacillota
CAG
Leu
>WENV170028176
CDYE01003131
257778
Bacillota
CGT
Thr
>WENV170028188
CDYE01003631
414706
Bacillota
CTC
Glu
>WENV170028193
CDYE01003703
71766
Bacillota
CAG
Leu
>WENV170028210
CDYE01004185
369273
Bacillota
TTG
Gln
>WENV170028217
CDYE01004352
371071
Bacillota
GCC
Gly
>WENV170028221
CDYE01004555
64817
Bacillota
TAA
Leu
>WENV170028246
CDYE01005754
269920
Bacillota
CGC
Ala
>WENV170028256
CDYE01006006
159068
Bacillota
GTC
Asp
>WENV170028258
CDYE01006006
64817
Bacillota
TAA
Leu
>WENV170028259
CDYE01006006
131001
Bacillota
TAG
Leu
>WENV170028260
CDYE01006051
371071
Bacillota
GCC
Gly
>WENV170028285
CDYE01006298
218062
Bacillota
ACG
Arg
>WENV170028289
CDYE01006537
161902
Bacillota
CAT
Met
>WENV170028296
CDYE01006619
217772
Bacillota
>WENV170028297
CDYE01006619
257787
Bacillota
GAA
Phe
>WENV170028298
CDYE01006619
259856
Bacillota
TTT
Lys
>WENV170028319
CDYE01007222
88697
Bacillota
CAA
Leu
>WENV170028320
CDYE01007251
162605
Bacillota
CCT
Arg
>WENV170028327
CDYE01007563
159070
Bacillota
GTG
His
>WENV170028331
CDYE01007720
369271
Bacillota
GCC
Gly
>WENV170028332
CDYE01007850
265902
Bacillota
GTG
His
>WENV170028340
CDYE01007967
159070
Bacillota
GTG
His
>WENV170028342
CDYE01007970
448208
Bacillota
TCC
Gly
>WENV170028347
CDYE01008090
257787
Bacillota
GAA
Phe
>WENV170028348
CDYE01008090
448208
Bacillota
TCC
Gly
>WENV170028355
CDYE01008200
257785
Bacillota
CGC
Ala
>WENV170028389
CDYE01008916
369271
Bacillota
GCC
Gly
>WENV170028391
CDYE01008960
369267
Bacillota
CTC
Glu
>WENV170028392
CDYE01008960
369267
Bacillota
CTC
Glu
>WENV170028408
CDYE01009422
131046
Bacillota
TAG
Leu
>WENV170028416
CDYE01009743
265901
Bacillota
TGT
Thr
>WENV170028422
CDYE01009807
90394
Bacillota
TAG
Leu
>WENV170028424
CDYE01009874
107693
Bacillota
GTA
Tyr
>WENV170028432
CDYE01010112
209081
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK