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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170028066
CDYE01000162
324834
Bacteroidota
CCC
Gly
>WENV170028069
CDYE01000195
49944
Bacteroidota
TAA
Leu
>WENV170028071
CDYE01000195
49944
Bacteroidota
TAA
Leu
>WENV170028100
CDYE01000805
24259
Bacteroidota
GGA
Ser
>WENV170028102
CDYE01000847
155049
Bacteroidota
TAC
Val
>WENV170028103
CDYE01000847
155049
Bacteroidota
TAC
Val
>WENV170028109
CDYE01001070
24636
Bacteroidota
GGA
Ser
>WENV170028113
CDYE01001145
293859
Bacteroidota
CCA
Trp
>WENV170028111
CDYE01001145
95591
Bacteroidota
GTA
Tyr
>WENV170028112
CDYE01001145
369579
Bacteroidota
GGT
Thr
>WENV170028118
CDYE01001245
448601
Bacteroidota
TTG
Gln
>WENV170028117
CDYE01001245
105282
Bacteroidota
TAG
Leu
>WENV170028120
CDYE01001361
139253
Bacteroidota
GGG
Pro
>WENV170028123
CDYE01001425
371247
Bacteroidota
TTC
Glu
>WENV170028125
CDYE01001425
449098
Bacteroidota
>WENV170028136
CDYE01001959
449090
Bacteroidota
CTG
Gln
>WENV170028137
CDYE01001959
449090
Bacteroidota
CTG
Gln
>WENV170028140
CDYE01002101
18452
Bacteroidota
GGA
Ser
>WENV170028149
CDYE01002427
374505
Bacteroidota
CTC
Glu
>WENV170028160
CDYE01002488
49944
Bacteroidota
TAA
Leu
>WENV170028162
CDYE01002488
49944
Bacteroidota
TAA
Leu
>WENV170028157
CDYE01002488
155049
Bacteroidota
TAC
Val
>WENV170028158
CDYE01002488
155049
Bacteroidota
TAC
Val
>WENV170028156
CDYE01002488
18452
Bacteroidota
GGA
Ser
>WENV170028165
CDYE01002552
238847
Bacteroidota
GGC
Ala
>WENV170028164
CDYE01002552
322169
Bacteroidota
CCA
Trp
>WENV170028166
CDYE01002552
259272
Bacteroidota
CGT
Thr
>WENV170028180
CDYE01003415
160436
Bacteroidota
GGC
Ala
>WENV170028198
CDYE01003940
65115
Bacteroidota
GAG
Leu
>WENV170028201
CDYE01003940
65115
Bacteroidota
GAG
Leu
>WENV170028222
CDYE01004631
324834
Bacteroidota
CCC
Gly
>WENV170028225
CDYE01004646
258386
Bacteroidota
TTT
Lys
>WENV170028229
CDYE01004707
374505
Bacteroidota
CTC
Glu
>WENV170028230
CDYE01004796
236813
Bacteroidota
GTC
Asp
>WENV170028233
CDYE01004868
153591
Bacteroidota
TGG
Pro
>WENV170028242
CDYE01005654
155049
Bacteroidota
TAC
Val
>WENV170028243
CDYE01005654
155049
Bacteroidota
TAC
Val
>WENV170028262
CDYE01006126
160459
Bacteroidota
GGC
Ala
>WENV170028265
CDYE01006151
161400
Bacteroidota
>WENV170028294
CDYE01006601
371314
Bacteroidota
GCA
Cys
>WENV170028300
CDYE01006707
259271
Bacteroidota
CTT
Lys
>WENV170028301
CDYE01006707
259271
Bacteroidota
CTT
Lys
>WENV170028302
CDYE01006707
259271
Bacteroidota
CTT
Lys
>WENV170028308
CDYE01006989
236813
Bacteroidota
GTC
Asp
>WENV170028315
CDYE01007138
371226
Bacteroidota
CCT
Arg
>WENV170028326
CDYE01007508
139254
Bacteroidota
GAC
Val
>WENV170028328
CDYE01007568
205503
Bacteroidota
GTG
His
>WENV170028330
CDYE01007619
24259
Bacteroidota
GGA
Ser
>WENV170028336
CDYE01007857
414074
Bacteroidota
>WENV170028337
CDYE01007857
414074
Bacteroidota
>WENV170028371
CDYE01008496
65502
Bacteroidota
CAA
Leu
>WENV170028376
CDYE01008590
236821
Bacteroidota
>WENV170028384
CDYE01008761
449090
Bacteroidota
CTG
Gln
>WENV170028397
CDYE01009094
23774
Bacteroidota
GGA
Ser
>WENV170028421
CDYE01009795
182139
Bacteroidota
CGG
Pro
>WENV170028423
CDYE01009873
322951
Bacteroidota
TTT
Lys
>WENV170028425
CDYE01009875
26247
Bacteroidota
CGA
Ser
>WENV170028430
CDYE01010073
374505
Bacteroidota
CTC
Glu
>WENV170028435
CDYE01010208
24259
Bacteroidota
GGA
Ser
>WENV170028441
CDYE01010519
374505
Bacteroidota
CTC
Glu
>WENV170028447
CDYE01010664
216052
Bacteroidota
TCT
Arg
>WENV170028449
CDYE01010664
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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