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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062038
CDZJ01000240
157838
Bacillota
GTC
Asp
>WENV170062083
CDZJ01001734
201704
Bacillota
GAT
Ile
>WENV170062091
CDZJ01001964
413152
Bacillota
TCC
Gly
>WENV170062144
CDZJ01003785
307003
Bacillota
TGC
Ala
>WENV170062145
CDZJ01003815
144594
Bacillota
CAC
Val
>WENV170062150
CDZJ01004006
201704
Bacillota
GAT
Ile
>WENV170062168
CDZJ01004728
144583
Bacillota
ACG
Arg
>WENV170062190
CDZJ01005210
316443
Bacillota
GTC
Asp
>WENV170062192
CDZJ01005210
109476
Bacillota
TAG
Leu
>WENV170062322
CDZJ01009381
157838
Bacillota
GTC
Asp
>WENV170062323
CDZJ01009381
295033
Bacillota
GAA
Phe
>WENV170062324
CDZJ01009381
248965
Bacillota
GCC
Gly
>WENV170062339
CDZJ01009967
202812
Bacillota
CAT
Met
>WENV170062348
CDZJ01010441
341763
Bacillota
CTC
Glu
>WENV170062357
CDZJ01010824
235098
Bacillota
GAC
Val
>WENV170062394
CDZJ01011976
413152
Bacillota
TCC
Gly
>WENV170062417
CDZJ01013309
201704
Bacillota
GAT
Ile
>WENV170062418
CDZJ01013309
246023
Bacillota
TGC
Ala
>WENV170062441
CDZJ01014447
341763
Bacillota
CTC
Glu
>WENV170062484
CDZJ01016279
202812
Bacillota
CAT
Met
>WENV170062540
CDZJ01018804
202812
Bacillota
CAT
Met
>WENV170062573
CDZJ01020303
310822
Bacillota
CTT
Lys
>WENV170062575
CDZJ01020319
241441
Bacillota
GCC
Gly
>WENV170062593
CDZJ01020836
341763
Bacillota
CTC
Glu
>WENV170062613
CDZJ01021655
298620
Bacillota
CAT
Met
>WENV170062630
CDZJ01021994
245386
Bacillota
CCA
Trp
>WENV170062633
CDZJ01021994
241441
Bacillota
GCC
Gly
>WENV170062706
CDZJ01023875
413152
Bacillota
TCC
Gly
>WENV170062786
CDZJ01026859
245386
Bacillota
CCA
Trp
>WENV170062795
CDZJ01027049
241441
Bacillota
GCC
Gly
>WENV170062801
CDZJ01027294
309417
Bacillota
GGC
Ala
>WENV170062830
CDZJ01028393
144594
Bacillota
CAC
Val
>WENV170062836
CDZJ01028763
241441
Bacillota
GCC
Gly
>WENV170062925
CDZJ01031135
100326
Bacillota
GTA
Tyr
>WENV170062926
CDZJ01031156
248965
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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