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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078219
CDZV01014408
190892
Actinomycetota
CAT
Met
>WENV170078430
CDZV01024798
105930
Actinomycetota
TAA
Leu
>WENV170078687
CDZV01035196
105929
Actinomycetota
GTA
Tyr
>WENV170078480
CDZV01026939
293317
Actinomycetota
GGC
Ala
>WENV170078683
CDZV01035052
293317
Actinomycetota
GGC
Ala
>WENV170077978
CDZV01003865
162410
Actinomycetota
TCT
Arg
>WENV170077942
CDZV01002472
261299
Actinomycetota
GCC
Gly
>WENV170078574
CDZV01031397
261299
Actinomycetota
GCC
Gly
>WENV170078539
CDZV01029542
322268
Actinomycetota
CGT
Thr
>WENV170078100
CDZV01009742
211952
Actinomycetota
ACG
Arg
>WENV170078189
CDZV01013131
261298
Actinomycetota
CGT
Thr
>WENV170079059
CDZV01049880
261298
Actinomycetota
CGT
Thr
>WENV170077971
CDZV01003641
26695
Actinomycetota
GAG
Leu
>WENV170078000
CDZV01005307
139249
Actinomycetota
GTC
Asp
>WENV170078926
CDZV01044173
58412
Actinomycetota
CGA
Ser
>WENV170078878
CDZV01042771
167861
Actinomycetota
CAA
Leu
>WENV170078204
CDZV01013586
162417
Actinomycetota
CGG
Pro
>WENV170079198
CDZV01055821
371217
Actinomycetota
CAC
Val
>WENV170078059
CDZV01007911
18633
Actinomycetota
CGA
Ser
>WENV170078181
CDZV01012862
261306
Actinomycetota
>WENV170078345
CDZV01020464
133430
Actinomycetota
TAA
Leu
>WENV170078626
CDZV01032913
162411
Actinomycetota
CCG
Arg
>WENV170078575
CDZV01031401
162414
Actinomycetota
GAT
Ile
>WENV170078577
CDZV01031401
162414
Actinomycetota
GAT
Ile
>WENV170078993
CDZV01046799
26694
Actinomycetota
TGA
Ser
>WENV170078499
CDZV01028152
22018
Actinomycetota
GAG
Leu
>WENV170078686
CDZV01035196
370050
Actinomycetota
TGT
Thr
>WENV170078578
CDZV01031429
218329
Actinomycetota
CTT
Lys
>WENV170078058
CDZV01007911
18632
Actinomycetota
GGA
Ser
>WENV170078688
CDZV01035196
261300
Actinomycetota
GGT
Thr
>WENV170078257
CDZV01015556
162416
Actinomycetota
GTG
His
>WENV170078874
CDZV01042638
449079
Actinomycetota
CTG
Gln
>WENV170077991
CDZV01004542
448231
Actinomycetota
CCC
Gly
>WENV170079290
CDZV01059310
124817
Actinomycetota
TAG
Leu
>WENV170078306
CDZV01017222
261304
Actinomycetota
GAA
Phe
>WENV170077896
CDZV01001374
162413
Actinomycetota
TTC
Glu
>WENV170079265
CDZV01058747
261307
Actinomycetota
TAC
Val
>WENV170078759
CDZV01038261
183611
Actinomycetota
GGG
Pro
>WENV170078548
CDZV01030061
257872
Actinomycetota
CGT
Thr
>WENV170078804
CDZV01039829
65500
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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