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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077875
CDZV01000837
9070
Verrucomicrobiota
CGA
Ser
>WENV170078794
CDZV01039230
370537
Verrucomicrobiota
CCG
Arg
>WENV170078986
CDZV01045906
290976
Verrucomicrobiota
GGC
Ala
>WENV170078253
CDZV01015503
88984
Verrucomicrobiota
GTA
Tyr
>WENV170078650
CDZV01033847
448769
Verrucomicrobiota
TCC
Gly
>WENV170078780
CDZV01038766
448769
Verrucomicrobiota
TCC
Gly
>WENV170078305
CDZV01017221
88983
Verrucomicrobiota
TAA
Leu
>WENV170078364
CDZV01021487
26467
Verrucomicrobiota
GGA
Ser
>WENV170079043
CDZV01048227
370526
Verrucomicrobiota
CTG
Gln
>WENV170078049
CDZV01007702
50031
Verrucomicrobiota
TGA
Ser
>WENV170078088
CDZV01009187
88985
Verrucomicrobiota
AAG
Leu
>WENV170078985
CDZV01045906
370525
Verrucomicrobiota
TTG
Gln
>WENV170078714
CDZV01035706
65262
Verrucomicrobiota
CAG
Leu
>WENV170079238
CDZV01057221
8029
Verrucomicrobiota
GCT
Ser
>WENV170078363
CDZV01021487
139132
Verrucomicrobiota
GTC
Asp
>WENV170079302
CDZV01060162
139132
Verrucomicrobiota
GTC
Asp
>WENV170078010
CDZV01005814
370538
Verrucomicrobiota
CGT
Thr
>WENV170078087
CDZV01009187
260061
Verrucomicrobiota
>WENV170078816
CDZV01040732
388804
Verrucomicrobiota
TAC
Val
>WENV170078652
CDZV01033847
161141
Verrucomicrobiota
TGG
Pro
>WENV170078782
CDZV01038766
161141
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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