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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078013
CDZV01005814
246677
Verrucomicrobiota
CTT
Lys
>WENV170078012
CDZV01005814
246677
Verrucomicrobiota
CTT
Lys
>WENV170078011
CDZV01005814
246677
Verrucomicrobiota
CTT
Lys
>WENV170078010
CDZV01005814
344842
Verrucomicrobiota
CGT
Thr
>WENV170078014
CDZV01005814
155268
Verrucomicrobiota
CGG
Pro
>WENV170078048
CDZV01007702
345133
Verrucomicrobiota
GAC
Val
>WENV170078049
CDZV01007702
46246
Verrucomicrobiota
TGA
Ser
>WENV170078085
CDZV01009187
246700
Verrucomicrobiota
TTC
Glu
>WENV170078086
CDZV01009187
344839
Verrucomicrobiota
GTG
His
>WENV170078087
CDZV01009187
246709
Verrucomicrobiota
CAT
Met
>WENV170078099
CDZV01009718
344841
Verrucomicrobiota
CAC
Val
>WENV170078253
CDZV01015503
82054
Verrucomicrobiota
GTA
Tyr
>WENV170078252
CDZV01015503
345124
Verrucomicrobiota
GTT
Asn
>WENV170078293
CDZV01016880
155256
Verrucomicrobiota
TCT
Arg
>WENV170078305
CDZV01017221
82056
Verrucomicrobiota
TAA
Leu
>WENV170078357
CDZV01020934
170105
Verrucomicrobiota
CAT
Met
>WENV170078363
CDZV01021487
128202
Verrucomicrobiota
GTC
Asp
>WENV170078397
CDZV01022863
344751
Verrucomicrobiota
GGT
Thr
>WENV170078452
CDZV01025716
368497
Verrucomicrobiota
GCC
Gly
>WENV170078554
CDZV01030502
344844
Verrucomicrobiota
GCA
Cys
>WENV170078555
CDZV01030502
246700
Verrucomicrobiota
TTC
Glu
>WENV170078597
CDZV01031903
246701
Verrucomicrobiota
TTT
Lys
>WENV170078646
CDZV01033847
119661
Verrucomicrobiota
CAA
Leu
>WENV170078648
CDZV01033847
155264
Verrucomicrobiota
GGG
Pro
>WENV170078649
CDZV01033847
414625
Verrucomicrobiota
CCC
Gly
>WENV170078647
CDZV01033847
97755
Verrucomicrobiota
TAG
Leu
>WENV170078650
CDZV01033847
419909
Verrucomicrobiota
TCC
Gly
>WENV170078653
CDZV01033847
345110
Verrucomicrobiota
CCT
Arg
>WENV170078651
CDZV01033847
246728
Verrucomicrobiota
GAA
Phe
>WENV170078652
CDZV01033847
154693
Verrucomicrobiota
TGG
Pro
>WENV170078744
CDZV01036671
246687
Verrucomicrobiota
CGC
Ala
>WENV170078778
CDZV01038765
345115
Verrucomicrobiota
CAT
Met
>WENV170078779
CDZV01038765
368497
Verrucomicrobiota
GCC
Gly
>WENV170078783
CDZV01038766
155264
Verrucomicrobiota
GGG
Pro
>WENV170078784
CDZV01038766
414625
Verrucomicrobiota
CCC
Gly
>WENV170078780
CDZV01038766
419909
Verrucomicrobiota
TCC
Gly
>WENV170078781
CDZV01038766
246728
Verrucomicrobiota
GAA
Phe
>WENV170078782
CDZV01038766
154693
Verrucomicrobiota
TGG
Pro
>WENV170078794
CDZV01039230
345142
Verrucomicrobiota
CCG
Arg
>WENV170078985
CDZV01045906
345141
Verrucomicrobiota
TTG
Gln
>WENV170078996
CDZV01046853
246677
Verrucomicrobiota
CTT
Lys
>WENV170078995
CDZV01046853
246677
Verrucomicrobiota
CTT
Lys
>WENV170078994
CDZV01046853
246677
Verrucomicrobiota
CTT
Lys
>WENV170079042
CDZV01048226
368497
Verrucomicrobiota
GCC
Gly
>WENV170079043
CDZV01048227
344845
Verrucomicrobiota
CTG
Gln
>WENV170079238
CDZV01057221
7256
Verrucomicrobiota
GCT
Ser
>WENV170079302
CDZV01060162
128202
Verrucomicrobiota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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