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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109211
CECA01069189
159893
Bacteroidota
TCT
Arg
>WENV170108783
CECA01046227
65502
Bacteroidota
CAA
Leu
>WENV170108168
CECA01014797
369838
Bacteroidota
CCT
Arg
>WENV170108424
CECA01029331
236813
Bacteroidota
GTC
Asp
>WENV170108688
CECA01041025
236813
Bacteroidota
GTC
Asp
>WENV170109262
CECA01071034
236813
Bacteroidota
GTC
Asp
>WENV170109263
CECA01071034
236813
Bacteroidota
GTC
Asp
>WENV170109264
CECA01071034
236813
Bacteroidota
GTC
Asp
>WENV170109265
CECA01071034
236813
Bacteroidota
GTC
Asp
>WENV170108275
CECA01020818
258780
Bacteroidota
>WENV170109185
CECA01067829
258780
Bacteroidota
>WENV170109351
CECA01074587
160416
Bacteroidota
GTG
His
>WENV170109352
CECA01074587
160416
Bacteroidota
GTG
His
>WENV170108574
CECA01036967
272161
Bacteroidota
CGT
Thr
>WENV170108153
CECA01014425
65110
Bacteroidota
CAG
Leu
>WENV170108899
CECA01052012
65110
Bacteroidota
CAG
Leu
>WENV170108116
CECA01012888
49944
Bacteroidota
TAA
Leu
>WENV170108118
CECA01012888
49944
Bacteroidota
TAA
Leu
>WENV170108660
CECA01040267
49944
Bacteroidota
TAA
Leu
>WENV170107984
CECA01003237
371226
Bacteroidota
CCT
Arg
>WENV170109292
CECA01071464
261457
Bacteroidota
GCC
Gly
>WENV170108150
CECA01014425
182139
Bacteroidota
CGG
Pro
>WENV170108892
CECA01052012
182139
Bacteroidota
CGG
Pro
>WENV170108047
CECA01008054
139254
Bacteroidota
GAC
Val
>WENV170108112
CECA01012472
139254
Bacteroidota
GAC
Val
>WENV170107995
CECA01004144
371242
Bacteroidota
CCT
Arg
>WENV170108071
CECA01009907
38349
Bacteroidota
CGA
Ser
>WENV170109134
CECA01063878
38349
Bacteroidota
CGA
Ser
>WENV170108472
CECA01031080
18662
Bacteroidota
GGA
Ser
>WENV170108209
CECA01017825
259292
Bacteroidota
CGT
Thr
>WENV170108262
CECA01020165
259292
Bacteroidota
CGT
Thr
>WENV170108974
CECA01055675
65111
Bacteroidota
CAA
Leu
>WENV170109173
CECA01066702
26362
Bacteroidota
GCT
Ser
>WENV170109237
CECA01070390
261339
Bacteroidota
CCA
Trp
>WENV170108311
CECA01023181
101772
Bacteroidota
GTA
Tyr
>WENV170108426
CECA01029331
101772
Bacteroidota
GTA
Tyr
>WENV170108744
CECA01044576
101772
Bacteroidota
GTA
Tyr
>WENV170109259
CECA01071034
101772
Bacteroidota
GTA
Tyr
>WENV170109350
CECA01074587
101772
Bacteroidota
GTA
Tyr
>WENV170109358
CECA01075077
101772
Bacteroidota
GTA
Tyr
>WENV170109240
CECA01070390
105937
Bacteroidota
GTA
Tyr
>WENV170109123
CECA01062906
50713
Bacteroidota
TGA
Ser
>WENV170109236
CECA01070390
261338
Bacteroidota
GTT
Asn
>WENV170108828
CECA01048039
159589
Bacteroidota
>WENV170109244
CECA01070402
452097
Bacteroidota
CTG
Gln
>WENV170108746
CECA01044883
154165
Bacteroidota
GGG
Pro
>WENV170109214
CECA01069689
154165
Bacteroidota
GGG
Pro
>WENV170109267
CECA01071038
154165
Bacteroidota
GGG
Pro
>WENV170107936
CECA01000650
161250
Bacteroidota
GTT
Asn
>WENV170108365
CECA01026431
153591
Bacteroidota
TGG
Pro
>WENV170108402
CECA01028647
120345
Bacteroidota
TAG
Leu
>WENV170109242
CECA01070400
238847
Bacteroidota
GGC
Ala
>WENV170108748
CECA01045033
205503
Bacteroidota
GTG
His
>WENV170108265
CECA01020270
105470
Bacteroidota
TAG
Leu
>WENV170108077
CECA01009954
236821
Bacteroidota
>WENV170108539
CECA01034501
236821
Bacteroidota
>WENV170109357
CECA01074754
236821
Bacteroidota
>WENV170109070
CECA01060228
271690
Bacteroidota
TTT
Lys
>WENV170108131
CECA01013540
322169
Bacteroidota
CCA
Trp
>WENV170109261
CECA01071034
322169
Bacteroidota
CCA
Trp
>WENV170108332
CECA01024421
106801
Bacteroidota
CAG
Leu
>WENV170107986
CECA01003296
322951
Bacteroidota
TTT
Lys
>WENV170108243
CECA01019143
322951
Bacteroidota
TTT
Lys
>WENV170109094
CECA01061169
322951
Bacteroidota
TTT
Lys
>WENV170108233
CECA01019086
71334
Bacteroidota
GAG
Leu
>WENV170108577
CECA01037432
259271
Bacteroidota
CTT
Lys
>WENV170108578
CECA01037432
259271
Bacteroidota
CTT
Lys
>WENV170108057
CECA01008844
259223
Bacteroidota
>WENV170108058
CECA01008844
259223
Bacteroidota
>WENV170108735
CECA01044027
259223
Bacteroidota
>WENV170108736
CECA01044027
259223
Bacteroidota
>WENV170108737
CECA01044027
259223
Bacteroidota
>WENV170108738
CECA01044027
259223
Bacteroidota
>WENV170108286
CECA01022395
448605
Bacteroidota
CTG
Gln
>WENV170108154
CECA01014425
259272
Bacteroidota
CGT
Thr
>WENV170108803
CECA01046605
259272
Bacteroidota
CGT
Thr
>WENV170108900
CECA01052012
259272
Bacteroidota
CGT
Thr
>WENV170108533
CECA01034352
141365
Bacteroidota
GGG
Pro
>WENV170109238
CECA01070390
449089
Bacteroidota
TTG
Gln
>WENV170109023
CECA01058014
60666
Bacteroidota
TGA
Ser
>WENV170108665
CECA01040269
402298
Bacteroidota
GGT
Thr
>WENV170108152
CECA01014425
160417
Bacteroidota
GGC
Ala
>WENV170108894
CECA01052012
160417
Bacteroidota
GGC
Ala
>WENV170108725
CECA01043318
321470
Bacteroidota
GAA
Phe
>WENV170108323
CECA01023780
166971
Bacteroidota
>WENV170108612
CECA01038938
166971
Bacteroidota
>WENV170108962
CECA01055203
166971
Bacteroidota
>WENV170109316
CECA01072450
392603
Bacteroidota
TTC
Glu
>WENV170108333
CECA01024723
449090
Bacteroidota
CTG
Gln
>WENV170108102
CECA01012224
307992
Bacteroidota
GAA
Phe
>WENV170109168
CECA01066225
58386
Bacteroidota
TGA
Ser
>WENV170108457
CECA01030220
216052
Bacteroidota
TCT
Arg
>WENV170109155
CECA01065579
139253
Bacteroidota
GGG
Pro
>WENV170108075
CECA01009907
414074
Bacteroidota
>WENV170108545
CECA01035575
414074
Bacteroidota
>WENV170109138
CECA01063878
414074
Bacteroidota
>WENV170109312
CECA01072177
414074
Bacteroidota
>WENV170109371
CECA01075670
414074
Bacteroidota
>WENV170109235
CECA01070390
261337
Bacteroidota
>WENV170108946
CECA01055109
293859
Bacteroidota
CCA
Trp
>WENV170109311
CECA01072177
142773
Bacteroidota
TGG
Pro
>WENV170109260
CECA01071034
369579
Bacteroidota
GGT
Thr
>WENV170108191
CECA01016596
160415
Bacteroidota
TCT
Arg
>WENV170108148
CECA01014227
448601
Bacteroidota
TTG
Gln
>WENV170108791
CECA01046316
448601
Bacteroidota
TTG
Gln
>WENV170109364
CECA01075242
448601
Bacteroidota
TTG
Gln
>WENV170109239
CECA01070390
371225
Bacteroidota
TTC
Glu
>WENV170108306
CECA01023004
18452
Bacteroidota
GGA
Ser
>WENV170108449
CECA01029976
18452
Bacteroidota
GGA
Ser
>WENV170108895
CECA01052012
18452
Bacteroidota
GGA
Ser
>WENV170109279
CECA01071092
18452
Bacteroidota
GGA
Ser
>WENV170108459
CECA01030401
371314
Bacteroidota
GCA
Cys
>WENV170109172
CECA01066702
371314
Bacteroidota
GCA
Cys
>WENV170108132
CECA01013544
410456
Bacteroidota
CCC
Gly
>WENV170108973
CECA01055675
105282
Bacteroidota
TAG
Leu
>WENV170109365
CECA01075242
105282
Bacteroidota
TAG
Leu
>WENV170108694
CECA01041712
261340
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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