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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170108807
CECA01046919
235097
Bacteroidota
TTT
Lys
>WENV170108943
CECA01054570
235097
Bacteroidota
TTT
Lys
>WENV170108209
CECA01017825
235102
Bacteroidota
CGT
Thr
>WENV170108262
CECA01020165
235102
Bacteroidota
CGT
Thr
>WENV170108057
CECA01008844
267954
Bacteroidota
GCC
Gly
>WENV170108058
CECA01008844
267954
Bacteroidota
GCC
Gly
>WENV170108735
CECA01044027
267954
Bacteroidota
GCC
Gly
>WENV170108736
CECA01044027
267954
Bacteroidota
GCC
Gly
>WENV170108737
CECA01044027
267954
Bacteroidota
GCC
Gly
>WENV170108738
CECA01044027
267954
Bacteroidota
GCC
Gly
>WENV170108150
CECA01014425
144657
Bacteroidota
CGG
Pro
>WENV170108892
CECA01052012
144657
Bacteroidota
CGG
Pro
>WENV170108374
CECA01026866
243025
Bacteroidota
CAT
Met
>WENV170109260
CECA01071034
339341
Bacteroidota
GGT
Thr
>WENV170108168
CECA01014797
343138
Bacteroidota
CCT
Arg
>WENV170108233
CECA01019086
58715
Bacteroidota
GAG
Leu
>WENV170109123
CECA01062906
46165
Bacteroidota
TGA
Ser
>WENV170109313
CECA01072214
17323
Bacteroidota
GGA
Ser
>WENV170109371
CECA01075670
338486
Bacteroidota
CAT
Met
>WENV170109312
CECA01072177
338486
Bacteroidota
CAT
Met
>WENV170109138
CECA01063878
338486
Bacteroidota
CAT
Met
>WENV170108545
CECA01035575
338486
Bacteroidota
CAT
Met
>WENV170108075
CECA01009907
338486
Bacteroidota
CAT
Met
>WENV170108899
CECA01052012
59689
Bacteroidota
CAG
Leu
>WENV170108153
CECA01014425
59689
Bacteroidota
CAG
Leu
>WENV170107994
CECA01004144
436206
Bacteroidota
TTG
Gln
>WENV170109279
CECA01071092
20893
Bacteroidota
GGA
Ser
>WENV170108895
CECA01052012
20893
Bacteroidota
GGA
Ser
>WENV170108449
CECA01029976
20893
Bacteroidota
GGA
Ser
>WENV170109136
CECA01063878
235203
Bacteroidota
TTT
Lys
>WENV170108975
CECA01055675
235203
Bacteroidota
TTT
Lys
>WENV170108476
CECA01031233
235203
Bacteroidota
TTT
Lys
>WENV170108073
CECA01009907
235203
Bacteroidota
TTT
Lys
>WENV170108578
CECA01037432
238121
Bacteroidota
CTT
Lys
>WENV170108577
CECA01037432
238121
Bacteroidota
CTT
Lys
>WENV170109171
CECA01066702
338132
Bacteroidota
GCA
Cys
>WENV170109040
CECA01059122
338132
Bacteroidota
GCA
Cys
>WENV170108458
CECA01030401
338132
Bacteroidota
GCA
Cys
>WENV170108974
CECA01055675
58714
Bacteroidota
CAA
Leu
>WENV170109176
CECA01066717
301449
Bacteroidota
CGG
Pro
>WENV170108457
CECA01030220
144933
Bacteroidota
TCT
Arg
>WENV170108500
CECA01032529
136207
Bacteroidota
TAC
Val
>WENV170108499
CECA01032529
136207
Bacteroidota
TAC
Val
>WENV170108498
CECA01032529
136207
Bacteroidota
TAC
Val
>WENV170109185
CECA01067829
235207
Bacteroidota
CAT
Met
>WENV170108275
CECA01020818
235207
Bacteroidota
CAT
Met
>WENV170109352
CECA01074587
144659
Bacteroidota
GTG
His
>WENV170109351
CECA01074587
144659
Bacteroidota
GTG
His
>WENV170108893
CECA01052012
235180
Bacteroidota
CCA
Trp
>WENV170108151
CECA01014425
235180
Bacteroidota
CCA
Trp
>WENV170109358
CECA01075077
80614
Bacteroidota
>WENV170109350
CECA01074587
80614
Bacteroidota
>WENV170109259
CECA01071034
80614
Bacteroidota
>WENV170108744
CECA01044576
80614
Bacteroidota
>WENV170108426
CECA01029331
80614
Bacteroidota
>WENV170108311
CECA01023181
80614
Bacteroidota
>WENV170108962
CECA01055203
154643
Bacteroidota
CAT
Met
>WENV170108612
CECA01038938
154643
Bacteroidota
CAT
Met
>WENV170108323
CECA01023780
154643
Bacteroidota
CAT
Met
>WENV170108265
CECA01020270
95559
Bacteroidota
TAG
Leu
>WENV170108286
CECA01022395
419272
Bacteroidota
CTG
Gln
>WENV170108172
CECA01015240
144639
Bacteroidota
GGC
Ala
>WENV170108170
CECA01014797
338164
Bacteroidota
TTC
Glu
>WENV170108169
CECA01014797
338164
Bacteroidota
TTC
Glu
>WENV170109365
CECA01075242
95875
Bacteroidota
TAG
Leu
>WENV170108973
CECA01055675
95875
Bacteroidota
TAG
Leu
>WENV170109267
CECA01071038
139743
Bacteroidota
GGG
Pro
>WENV170109214
CECA01069689
139743
Bacteroidota
GGG
Pro
>WENV170108746
CECA01044883
139743
Bacteroidota
GGG
Pro
>WENV170108533
CECA01034352
139743
Bacteroidota
GGG
Pro
>WENV170109280
CECA01071155
240012
Bacteroidota
CCC
Gly
>WENV170109254
CECA01070945
240012
Bacteroidota
CCC
Gly
>WENV170108191
CECA01016596
147439
Bacteroidota
TCT
Arg
>WENV170107936
CECA01000650
150485
Bacteroidota
GTT
Asn
>WENV170108725
CECA01043318
246641
Bacteroidota
GAA
Phe
>WENV170109268
CECA01071038
425638
Bacteroidota
CTG
Gln
>WENV170108604
CECA01038938
353927
Bacteroidota
TTC
Glu
>WENV170108021
CECA01005840
353927
Bacteroidota
TTC
Glu
>WENV170108020
CECA01005840
353927
Bacteroidota
TTC
Glu
>WENV170109265
CECA01071034
185921
Bacteroidota
GTC
Asp
>WENV170109264
CECA01071034
185921
Bacteroidota
GTC
Asp
>WENV170109263
CECA01071034
185921
Bacteroidota
GTC
Asp
>WENV170109262
CECA01071034
185921
Bacteroidota
GTC
Asp
>WENV170108424
CECA01029331
185921
Bacteroidota
GTC
Asp
>WENV170109173
CECA01066702
23696
Bacteroidota
GCT
Ser
>WENV170109244
CECA01070402
414426
Bacteroidota
CTG
Gln
>WENV170109168
CECA01066225
55270
Bacteroidota
TGA
Ser
>WENV170109146
CECA01064344
338125
Bacteroidota
CCT
Arg
>WENV170109017
CECA01057363
235129
Bacteroidota
GCC
Gly
>WENV170108661
CECA01040267
235129
Bacteroidota
GCC
Gly
>WENV170108659
CECA01040267
235129
Bacteroidota
GCC
Gly
>WENV170108231
CECA01019086
235129
Bacteroidota
GCC
Gly
>WENV170108119
CECA01012888
235129
Bacteroidota
GCC
Gly
>WENV170108117
CECA01012888
235129
Bacteroidota
GCC
Gly
>WENV170108115
CECA01012888
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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