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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121802
CENN01018986
306070
Alphaproteobacteria
CCA
Trp
>WENV170122259
CENN01062093
113700
Alphaproteobacteria
>WENV170121894
CENN01028189
340288
Alphaproteobacteria
GCC
Gly
>WENV170122304
CENN01067478
339454
Alphaproteobacteria
>WENV170122105
CENN01046985
129295
Alphaproteobacteria
GGG
Pro
>WENV170122736
CENN01178761
167926
Alphaproteobacteria
CAT
Met
>WENV170121787
CENN01017926
254522
Alphaproteobacteria
GAA
Phe
>WENV170121849
CENN01023529
242540
Alphaproteobacteria
TGC
Ala
>WENV170121786
CENN01017875
241518
Alphaproteobacteria
CCA
Trp
>WENV170122492
CENN01079736
187569
Alphaproteobacteria
CCG
Arg
>WENV170121756
CENN01015233
160158
Alphaproteobacteria
GAT
Ile
>WENV170122277
CENN01064604
266073
Alphaproteobacteria
TTT
Lys
>WENV170121875
CENN01026474
29831
Alphaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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