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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170122494
CENN01079754
108926
Alphaproteobacteria
GTA
Tyr
>WENV170121932
CENN01031236
396582
Alphaproteobacteria
GAC
Val
>WENV170122480
CENN01079476
396582
Alphaproteobacteria
GAC
Val
>WENV170121802
CENN01018986
259585
Alphaproteobacteria
CCA
Trp
>WENV170122259
CENN01062093
125595
Alphaproteobacteria
>WENV170122354
CENN01073308
369860
Alphaproteobacteria
TTG
Gln
>WENV170122293
CENN01066367
107914
Alphaproteobacteria
GAG
Leu
>WENV170122277
CENN01064604
278841
Alphaproteobacteria
TTT
Lys
>WENV170122532
CENN01095963
166553
Alphaproteobacteria
>WENV170122238
CENN01059287
166599
Alphaproteobacteria
CAT
Met
>WENV170121982
CENN01035709
377113
Alphaproteobacteria
GAC
Val
>WENV170122360
CENN01073886
263499
Alphaproteobacteria
CGT
Thr
>WENV170122304
CENN01067478
369668
Alphaproteobacteria
>WENV170122101
CENN01046681
372766
Alphaproteobacteria
TTG
Gln
>WENV170122379
CENN01075058
372766
Alphaproteobacteria
TTG
Gln
>WENV170122718
CENN01174573
370022
Alphaproteobacteria
GTT
Asn
>WENV170121750
CENN01014906
370677
Alphaproteobacteria
GGT
Thr
>WENV170122105
CENN01046985
141325
Alphaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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