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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170127497
CENP01216501
46671
Cyanobacteriota
TAA
Leu
>WENV170125019
CENP01021680
323812
Cyanobacteriota
GGC
Ala
>WENV170127552
CENP01220509
323812
Cyanobacteriota
GGC
Ala
>WENV170127578
CENP01222966
323812
Cyanobacteriota
GGC
Ala
>WENV170127866
CENP01237103
323812
Cyanobacteriota
GGC
Ala
>WENV170124821
CENP01010934
400868
Cyanobacteriota
TTG
Gln
>WENV170126403
CENP01113731
400868
Cyanobacteriota
TTG
Gln
>WENV170127279
CENP01199220
400868
Cyanobacteriota
TTG
Gln
>WENV170126594
CENP01130530
108944
Cyanobacteriota
GTA
Tyr
>WENV170124812
CENP01010416
160110
Cyanobacteriota
CCG
Arg
>WENV170124905
CENP01014955
161770
Cyanobacteriota
TCT
Arg
>WENV170124918
CENP01015619
161770
Cyanobacteriota
TCT
Arg
>WENV170125086
CENP01026465
161770
Cyanobacteriota
TCT
Arg
>WENV170125156
CENP01030220
161770
Cyanobacteriota
TCT
Arg
>WENV170125176
CENP01031507
161770
Cyanobacteriota
TCT
Arg
>WENV170125397
CENP01044467
161770
Cyanobacteriota
TCT
Arg
>WENV170125400
CENP01044791
161770
Cyanobacteriota
TCT
Arg
>WENV170126436
CENP01116131
161770
Cyanobacteriota
TCT
Arg
>WENV170126577
CENP01128596
161770
Cyanobacteriota
TCT
Arg
>WENV170126826
CENP01153963
161770
Cyanobacteriota
TCT
Arg
>WENV170126875
CENP01160545
161770
Cyanobacteriota
TCT
Arg
>WENV170126964
CENP01170442
161770
Cyanobacteriota
TCT
Arg
>WENV170127446
CENP01212970
161770
Cyanobacteriota
TCT
Arg
>WENV170127515
CENP01217714
161770
Cyanobacteriota
TCT
Arg
>WENV170127270
CENP01198512
89063
Cyanobacteriota
TAG
Leu
>WENV170124887
CENP01013701
161711
Cyanobacteriota
GTC
Asp
>WENV170127847
CENP01236606
302627
Cyanobacteriota
GGC
Ala
>WENV170126791
CENP01151210
160107
Cyanobacteriota
CAT
Met
>WENV170125767
CENP01066667
391767
Cyanobacteriota
TAC
Val
>WENV170126157
CENP01094140
370891
Cyanobacteriota
CGT
Thr
>WENV170125614
CENP01057545
369944
Cyanobacteriota
GAC
Val
>WENV170126911
CENP01164811
229867
Cyanobacteriota
>WENV170126313
CENP01106269
36294
Cyanobacteriota
GGA
Ser
>WENV170124793
CENP01009108
448924
Cyanobacteriota
TCC
Gly
>WENV170125007
CENP01020761
208138
Cyanobacteriota
CCT
Arg
>WENV170127299
CENP01201327
28527
Cyanobacteriota
CGA
Ser
>WENV170128029
CENP01278621
28527
Cyanobacteriota
CGA
Ser
>WENV170124965
CENP01018924
257760
Cyanobacteriota
CGC
Ala
>WENV170126712
CENP01144566
369938
Cyanobacteriota
GTT
Asn
>WENV170125627
CENP01058399
31819
Cyanobacteriota
TGA
Ser
>WENV170126265
CENP01102471
65045
Cyanobacteriota
CAG
Leu
>WENV170126883
CENP01161767
370922
Cyanobacteriota
GAC
Val
>WENV170126643
CENP01136130
65386
Cyanobacteriota
CAG
Leu
>WENV170124844
CENP01011696
370924
Cyanobacteriota
CCC
Gly
>WENV170125894
CENP01074443
161765
Cyanobacteriota
CAT
Met
>WENV170126595
CENP01130530
370841
Cyanobacteriota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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