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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170134625
CENU01127316
46671
Cyanobacteriota
TAA
Leu
>WENV170133173
CENU01009851
400868
Cyanobacteriota
TTG
Gln
>WENV170134399
CENU01101524
105782
Cyanobacteriota
AAG
Leu
>WENV170133251
CENU01014686
260661
Cyanobacteriota
>WENV170133702
CENU01044888
160110
Cyanobacteriota
CCG
Arg
>WENV170134952
CENU01161253
160110
Cyanobacteriota
CCG
Arg
>WENV170134618
CENU01126495
161770
Cyanobacteriota
TCT
Arg
>WENV170133676
CENU01042423
89063
Cyanobacteriota
TAG
Leu
>WENV170133565
CENU01033935
161711
Cyanobacteriota
GTC
Asp
>WENV170133175
CENU01010028
182044
Cyanobacteriota
GTC
Asp
>WENV170133405
CENU01023264
182044
Cyanobacteriota
GTC
Asp
>WENV170133459
CENU01027899
265805
Cyanobacteriota
>WENV170134516
CENU01115335
26602
Cyanobacteriota
TGA
Ser
>WENV170134633
CENU01127829
50867
Cyanobacteriota
TGA
Ser
>WENV170133807
CENU01052761
240023
Cyanobacteriota
ACG
Arg
>WENV170133445
CENU01026786
177202
Cyanobacteriota
TCT
Arg
>WENV170133879
CENU01060014
399462
Cyanobacteriota
GTT
Asn
>WENV170133174
CENU01010028
258993
Cyanobacteriota
CCA
Trp
>WENV170133404
CENU01023264
258993
Cyanobacteriota
CCA
Trp
>WENV170133629
CENU01038619
258993
Cyanobacteriota
CCA
Trp
>WENV170133075
CENU01002473
317075
Cyanobacteriota
CGC
Ala
>WENV170133227
CENU01012692
258996
Cyanobacteriota
GTG
His
>WENV170134315
CENU01095486
258996
Cyanobacteriota
GTG
His
>WENV170134347
CENU01097502
375129
Cyanobacteriota
TTG
Gln
>WENV170133742
CENU01046926
114789
Cyanobacteriota
TAG
Leu
>WENV170134023
CENU01071901
114789
Cyanobacteriota
TAG
Leu
>WENV170133115
CENU01005744
369944
Cyanobacteriota
GAC
Val
>WENV170133994
CENU01069098
369944
Cyanobacteriota
GAC
Val
>WENV170134393
CENU01101282
206160
Cyanobacteriota
CAT
Met
>WENV170133830
CENU01055151
258998
Cyanobacteriota
CGT
Thr
>WENV170133878
CENU01059935
258998
Cyanobacteriota
CGT
Thr
>WENV170133903
CENU01060953
208138
Cyanobacteriota
CCT
Arg
>WENV170134351
CENU01098105
208138
Cyanobacteriota
CCT
Arg
>WENV170133840
CENU01055915
28527
Cyanobacteriota
CGA
Ser
>WENV170133053
CENU01001141
198772
Cyanobacteriota
CCG
Arg
>WENV170133849
CENU01056373
171254
Cyanobacteriota
>WENV170134240
CENU01089757
26564
Cyanobacteriota
TGA
Ser
>WENV170133453
CENU01027487
284834
Cyanobacteriota
CGC
Ala
>WENV170133908
CENU01061359
369938
Cyanobacteriota
GTT
Asn
>WENV170134013
CENU01071065
369938
Cyanobacteriota
GTT
Asn
>WENV170134604
CENU01125209
369938
Cyanobacteriota
GTT
Asn
>WENV170133323
CENU01019303
160106
Cyanobacteriota
TCT
Arg
>WENV170135063
CENU01171377
370922
Cyanobacteriota
GAC
Val
>WENV170133229
CENU01012693
65386
Cyanobacteriota
CAG
Leu
>WENV170135117
CENU01176455
65386
Cyanobacteriota
CAG
Leu
>WENV170133796
CENU01051786
225134
Cyanobacteriota
CCG
Arg
>WENV170134015
CENU01071363
370924
Cyanobacteriota
CCC
Gly
>WENV170133318
CENU01019011
406747
Cyanobacteriota
TGT
Thr
>WENV170134045
CENU01073235
406747
Cyanobacteriota
TGT
Thr
>WENV170134883
CENU01153218
406747
Cyanobacteriota
TGT
Thr
>WENV170134946
CENU01160594
406747
Cyanobacteriota
TGT
Thr
>WENV170133417
CENU01023909
105814
Cyanobacteriota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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