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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170133115
CENU01005744
387387
Cyanobacteriota
GAC
Val
>WENV170133994
CENU01069098
387387
Cyanobacteriota
GAC
Val
>WENV170134347
CENU01097502
366531
Cyanobacteriota
TTG
Gln
>WENV170133649
CENU01039947
45941
Cyanobacteriota
CGA
Ser
>WENV170133173
CENU01009851
373624
Cyanobacteriota
TTG
Gln
>WENV170133565
CENU01033935
145761
Cyanobacteriota
GTC
Asp
>WENV170133227
CENU01012692
306125
Cyanobacteriota
GTG
His
>WENV170134315
CENU01095486
306125
Cyanobacteriota
GTG
His
>WENV170134045
CENU01073235
339690
Cyanobacteriota
TGT
Thr
>WENV170133318
CENU01019011
339690
Cyanobacteriota
TGT
Thr
>WENV170133879
CENU01060014
338782
Cyanobacteriota
GTT
Asn
>WENV170134516
CENU01115335
23668
Cyanobacteriota
TGA
Ser
>WENV170133807
CENU01052761
151879
Cyanobacteriota
>WENV170134015
CENU01071363
344607
Cyanobacteriota
CCC
Gly
>WENV170133847
CENU01056279
344607
Cyanobacteriota
CCC
Gly
>WENV170133075
CENU01002473
305373
Cyanobacteriota
CGC
Ala
>WENV170135063
CENU01171377
339688
Cyanobacteriota
GAC
Val
>WENV170133530
CENU01031254
148812
Cyanobacteriota
CGG
Pro
>WENV170133440
CENU01026174
148812
Cyanobacteriota
CGG
Pro
>WENV170133405
CENU01023264
190971
Cyanobacteriota
GTC
Asp
>WENV170133175
CENU01010028
190971
Cyanobacteriota
GTC
Asp
>WENV170133742
CENU01046926
101255
Cyanobacteriota
TAG
Leu
>WENV170133417
CENU01023909
101255
Cyanobacteriota
TAG
Leu
>WENV170134830
CENU01146139
11030
Cyanobacteriota
GCT
Ser
>WENV170133945
CENU01064022
11030
Cyanobacteriota
GCT
Ser
>WENV170134604
CENU01125209
379587
Cyanobacteriota
GTT
Asn
>WENV170134013
CENU01071065
379587
Cyanobacteriota
GTT
Asn
>WENV170133908
CENU01061359
379587
Cyanobacteriota
GTT
Asn
>WENV170133902
CENU01060923
339061
Cyanobacteriota
CAC
Val
>WENV170133251
CENU01014686
240100
Cyanobacteriota
CAT
Met
>WENV170134399
CENU01101524
95762
Cyanobacteriota
AAG
Leu
>WENV170134421
CENU01104565
301510
Cyanobacteriota
TGC
Ala
>WENV170133796
CENU01051786
188100
Cyanobacteriota
CCG
Arg
>WENV170134952
CENU01161253
147238
Cyanobacteriota
CCG
Arg
>WENV170133445
CENU01026786
153271
Cyanobacteriota
TCT
Arg
>WENV170133323
CENU01019303
153271
Cyanobacteriota
TCT
Arg
>WENV170135117
CENU01176455
68425
Cyanobacteriota
CAG
Leu
>WENV170133229
CENU01012693
68425
Cyanobacteriota
CAG
Leu
>WENV170133629
CENU01038619
275071
Cyanobacteriota
CCA
Trp
>WENV170133404
CENU01023264
275071
Cyanobacteriota
CCA
Trp
>WENV170133174
CENU01010028
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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