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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170147265
CENZ01126753
440354
Bacteroidota
GCA
Cys
>WENV170146041
CENZ01028318
306609
Bacteroidota
GAA
Phe
>WENV170146485
CENZ01057795
306609
Bacteroidota
GAA
Phe
>WENV170146703
CENZ01073191
306609
Bacteroidota
GAA
Phe
>WENV170145873
CENZ01018146
294483
Bacteroidota
TTT
Lys
>WENV170145826
CENZ01014253
241019
Bacteroidota
CAT
Met
>WENV170146446
CENZ01055294
241019
Bacteroidota
CAT
Met
>WENV170147162
CENZ01118276
241019
Bacteroidota
CAT
Met
>WENV170147273
CENZ01127848
180185
Bacteroidota
TGC
Ala
>WENV170147538
CENZ01160723
172532
Bacteroidota
GTC
Asp
>WENV170148241
CENZ01278884
236125
Bacteroidota
GAA
Phe
>WENV170146481
CENZ01057532
127458
Bacteroidota
GAC
Val
>WENV170147648
CENZ01173536
270933
Bacteroidota
CAT
Met
>WENV170147308
CENZ01132867
60611
Bacteroidota
GCT
Ser
>WENV170147614
CENZ01170111
151405
Bacteroidota
TGC
Ala
>WENV170148047
CENZ01203174
322068
Bacteroidota
TCC
Gly
>WENV170147439
CENZ01148748
322068
Bacteroidota
TCC
Gly
>WENV170147411
CENZ01145338
322068
Bacteroidota
TCC
Gly
>WENV170147137
CENZ01115574
322068
Bacteroidota
TCC
Gly
>WENV170146134
CENZ01034924
127414
Bacteroidota
TGG
Pro
>WENV170147681
CENZ01177307
149691
Bacteroidota
GTT
Asn
>WENV170146865
CENZ01088307
190649
Bacteroidota
GTT
Asn
>WENV170146789
CENZ01080890
190649
Bacteroidota
GTT
Asn
>WENV170146438
CENZ01054661
197220
Bacteroidota
TGT
Thr
>WENV170147369
CENZ01140110
290994
Bacteroidota
CAT
Met
>WENV170146063
CENZ01030025
17496
Bacteroidota
GGA
Ser
>WENV170145829
CENZ01014761
240684
Bacteroidota
TTT
Lys
>WENV170147737
CENZ01183107
165044
Bacteroidota
GTG
His
>WENV170147900
CENZ01196238
199382
Bacteroidota
GTT
Asn
>WENV170147309
CENZ01133030
145555
Bacteroidota
GTC
Asp
>WENV170147038
CENZ01104353
145555
Bacteroidota
GTC
Asp
>WENV170147285
CENZ01129352
153768
Bacteroidota
TGC
Ala
>WENV170147222
CENZ01123317
145507
Bacteroidota
TCT
Arg
>WENV170148285
CENZ01301776
240620
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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