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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170149142
CEOC01004724
149985
Alphaproteobacteria
ACG
Arg
>WENV170149240
CEOC01012289
113700
Alphaproteobacteria
>WENV170150264
CEOC01102449
113700
Alphaproteobacteria
>WENV170149767
CEOC01053934
23468
Alphaproteobacteria
GCT
Ser
>WENV170149212
CEOC01009826
254188
Alphaproteobacteria
CCA
Trp
>WENV170150198
CEOC01095064
339722
Alphaproteobacteria
TTG
Gln
>WENV170149587
CEOC01040260
249928
Alphaproteobacteria
TAC
Val
>WENV170150868
CEOC01164065
167926
Alphaproteobacteria
CAT
Met
>WENV170149873
CEOC01063712
167926
Alphaproteobacteria
CAT
Met
>WENV170149120
CEOC01002391
167926
Alphaproteobacteria
CAT
Met
>WENV170149676
CEOC01047770
161002
Alphaproteobacteria
GTG
His
>WENV170150574
CEOC01139383
254522
Alphaproteobacteria
GAA
Phe
>WENV170149763
CEOC01053682
359842
Alphaproteobacteria
GAC
Val
>WENV170149454
CEOC01030166
359842
Alphaproteobacteria
GAC
Val
>WENV170149791
CEOC01056285
348781
Alphaproteobacteria
GAA
Phe
>WENV170150470
CEOC01129788
266073
Alphaproteobacteria
TTT
Lys
>WENV170149363
CEOC01023664
268365
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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