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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170150371
CEOC01115045
158396
Gammaproteobacteria
ACG
Arg
>WENV170150106
CEOC01085275
149035
Gammaproteobacteria
CCG
Arg
>WENV170150179
CEOC01093389
268606
Gammaproteobacteria
TGT
Thr
>WENV170149352
CEOC01023076
61925
Gammaproteobacteria
TAA
Leu
>WENV170150101
CEOC01084370
171935
Gammaproteobacteria
ACG
Arg
>WENV170150834
CEOC01161772
171935
Gammaproteobacteria
ACG
Arg
>WENV170150952
CEOC01167282
171935
Gammaproteobacteria
ACG
Arg
>WENV170149858
CEOC01062496
46594
Gammaproteobacteria
GGA
Ser
>WENV170150331
CEOC01110746
46594
Gammaproteobacteria
GGA
Ser
>WENV170149548
CEOC01036838
240642
Gammaproteobacteria
GTT
Asn
>WENV170150796
CEOC01157988
149036
Gammaproteobacteria
CCA
Trp
>WENV170149829
CEOC01059147
245602
Gammaproteobacteria
TTT
Lys
>WENV170151377
CEOC01311125
264949
Gammaproteobacteria
GGC
Ala
>WENV170150193
CEOC01094754
412799
Gammaproteobacteria
GCA
Cys
>WENV170150961
CEOC01167645
260238
Gammaproteobacteria
>WENV170151294
CEOC01288001
411766
Gammaproteobacteria
GCA
Cys
>WENV170151155
CEOC01231387
247974
Gammaproteobacteria
CCA
Trp
>WENV170150990
CEOC01168516
238510
Gammaproteobacteria
GCC
Gly
>WENV170149248
CEOC01012836
10767
Gammaproteobacteria
GCT
Ser
>WENV170150156
CEOC01090885
99961
Gammaproteobacteria
GAG
Leu
>WENV170151334
CEOC01303624
411842
Gammaproteobacteria
GCA
Cys
>WENV170151172
CEOC01237140
59658
Gammaproteobacteria
CAA
Leu
>WENV170150757
CEOC01154193
149661
Gammaproteobacteria
CAT
Met
>WENV170150765
CEOC01155159
247088
Gammaproteobacteria
CCA
Trp
>WENV170149467
CEOC01030509
247088
Gammaproteobacteria
CCA
Trp
>WENV170151446
CEOC01319609
149037
Gammaproteobacteria
GAC
Val
>WENV170150968
CEOC01167753
245151
Gammaproteobacteria
GTG
His
>WENV170150966
CEOC01167753
157977
Gammaproteobacteria
TGG
Pro
>WENV170151333
CEOC01303624
270352
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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