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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170149196
CEOC01008633
65736
Gammaproteobacteria
TAA
Leu
>WENV170149219
CEOC01010615
105812
Gammaproteobacteria
GTA
Tyr
>WENV170149253
CEOC01014049
305458
Gammaproteobacteria
TAC
Val
>WENV170149259
CEOC01014595
265381
Gammaproteobacteria
GTT
Asn
>WENV170149266
CEOC01015212
451853
Gammaproteobacteria
GCA
Cys
>WENV170149406
CEOC01026459
451853
Gammaproteobacteria
GCA
Cys
>WENV170149502
CEOC01033288
451853
Gammaproteobacteria
GCA
Cys
>WENV170149526
CEOC01034513
448815
Gammaproteobacteria
TCC
Gly
>WENV170149829
CEOC01059147
263230
Gammaproteobacteria
TTT
Lys
>WENV170150008
CEOC01074187
262285
Gammaproteobacteria
TGC
Ala
>WENV170150041
CEOC01078380
65736
Gammaproteobacteria
TAA
Leu
>WENV170150501
CEOC01132235
451853
Gammaproteobacteria
GCA
Cys
>WENV170150506
CEOC01132496
65736
Gammaproteobacteria
TAA
Leu
>WENV170150714
CEOC01151845
65736
Gammaproteobacteria
TAA
Leu
>WENV170150737
CEOC01153342
263086
Gammaproteobacteria
GTT
Asn
>WENV170150758
CEOC01154193
410286
Gammaproteobacteria
TTG
Gln
>WENV170150781
CEOC01156401
451853
Gammaproteobacteria
GCA
Cys
>WENV170150796
CEOC01157988
172986
Gammaproteobacteria
CCA
Trp
>WENV170150797
CEOC01158011
316791
Gammaproteobacteria
GAA
Phe
>WENV170150834
CEOC01161772
195797
Gammaproteobacteria
ACG
Arg
>WENV170150852
CEOC01162703
177549
Gammaproteobacteria
CCG
Arg
>WENV170151128
CEOC01220489
164285
Gammaproteobacteria
TCG
Arg
>WENV170151172
CEOC01237140
65858
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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