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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170224607
CEQE01067085
237493
Alphaproteobacteria
CCA
Trp
>WENV170226558
CEQE01323608
58865
Alphaproteobacteria
GAG
Leu
>WENV170224658
CEQE01070838
95928
Alphaproteobacteria
TAG
Leu
>WENV170224914
CEQE01096410
162801
Alphaproteobacteria
GTG
His
>WENV170225271
CEQE01125180
236134
Alphaproteobacteria
TAC
Val
>WENV170223779
CEQE01005098
351511
Alphaproteobacteria
TTG
Gln
>WENV170224318
CEQE01044938
339725
Alphaproteobacteria
GAA
Phe
>WENV170225224
CEQE01119782
167926
Alphaproteobacteria
CAT
Met
>WENV170224369
CEQE01049871
167926
Alphaproteobacteria
CAT
Met
>WENV170225164
CEQE01114164
412281
Alphaproteobacteria
CTG
Gln
>WENV170225744
CEQE01148625
150356
Alphaproteobacteria
GTC
Asp
>WENV170225511
CEQE01141642
150356
Alphaproteobacteria
GTC
Asp
>WENV170225901
CEQE01189685
146852
Alphaproteobacteria
GTC
Asp
>WENV170224349
CEQE01048138
147289
Alphaproteobacteria
GTC
Asp
>WENV170224540
CEQE01062070
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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