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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170232116
CEQI01024779
97610
Bacteroidota
GTA
Tyr
>WENV170232678
CEQI01089286
99288
Bacteroidota
TAG
Leu
>WENV170232122
CEQI01025160
338625
Bacteroidota
TTC
Glu
>WENV170232227
CEQI01037903
236125
Bacteroidota
GAA
Phe
>WENV170232759
CEQI01097893
236125
Bacteroidota
GAA
Phe
>WENV170232117
CEQI01024779
364423
Bacteroidota
GGT
Thr
>WENV170232202
CEQI01034944
95728
Bacteroidota
GTA
Tyr
>WENV170232304
CEQI01047650
96678
Bacteroidota
TAG
Leu
>WENV170232656
CEQI01086762
238764
Bacteroidota
>WENV170232325
CEQI01050215
238764
Bacteroidota
>WENV170232226
CEQI01037856
235802
Bacteroidota
CAT
Met
>WENV170232115
CEQI01024779
150454
Bacteroidota
TGT
Thr
>WENV170232151
CEQI01029240
145555
Bacteroidota
GTC
Asp
>WENV170232357
CEQI01053277
240901
Bacteroidota
TTT
Lys
>WENV170232838
CEQI01104059
166633
Bacteroidota
GGC
Ala
>WENV170233034
CEQI01201387
128249
Bacteroidota
TGG
Pro
>WENV170232394
CEQI01056459
240620
Bacteroidota
GCC
Gly
>WENV170231937
CEQI01007205
179613
Bacteroidota
CAT
Met
>WENV170232940
CEQI01163275
127216
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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