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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170231838
CEQI01000196
164620
Bacteroidota
GTG
His
>WENV170231937
CEQI01007205
171098
Bacteroidota
>WENV170232066
CEQI01020750
50342
Bacteroidota
TGA
Ser
>WENV170232115
CEQI01024779
232558
Bacteroidota
TGT
Thr
>WENV170232157
CEQI01030561
165596
Bacteroidota
GGC
Ala
>WENV170232202
CEQI01034944
117444
Bacteroidota
GTA
Tyr
>WENV170232226
CEQI01037856
314601
Bacteroidota
>WENV170232227
CEQI01037903
311172
Bacteroidota
GAA
Phe
>WENV170232309
CEQI01048439
301008
Bacteroidota
TTG
Gln
>WENV170232521
CEQI01069142
310118
Bacteroidota
CCA
Trp
>WENV170232547
CEQI01072152
139500
Bacteroidota
TGG
Pro
>WENV170232627
CEQI01084527
116954
Bacteroidota
TAG
Leu
>WENV170232678
CEQI01089286
119207
Bacteroidota
TAG
Leu
>WENV170232705
CEQI01092543
116954
Bacteroidota
TAG
Leu
>WENV170232759
CEQI01097893
311172
Bacteroidota
GAA
Phe
>WENV170232838
CEQI01104059
159372
Bacteroidota
GGC
Ala
>WENV170232894
CEQI01141757
312522
Bacteroidota
TCC
Gly
>WENV170232940
CEQI01163275
139133
Bacteroidota
GGG
Pro
>WENV170233010
CEQI01194530
189987
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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