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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170232823
CEQI01100745
235681
Cyanobacteriota
CCA
Trp
>WENV170232825
CEQI01100758
23409
Cyanobacteriota
GGA
Ser
>WENV170231934
CEQI01006850
237009
Cyanobacteriota
GGC
Ala
>WENV170233096
CEQI01211477
264789
Cyanobacteriota
GGC
Ala
>WENV170232595
CEQI01079246
339686
Cyanobacteriota
TAC
Val
>WENV170232820
CEQI01100715
243201
Cyanobacteriota
CGC
Ala
>WENV170232796
CEQI01100364
95859
Cyanobacteriota
CAA
Leu
>WENV170232182
CEQI01033841
190959
Cyanobacteriota
GTC
Asp
>WENV170232371
CEQI01054348
23971
Cyanobacteriota
TGA
Ser
>WENV170232821
CEQI01100715
238068
Cyanobacteriota
CAT
Met
>WENV170232445
CEQI01061157
37223
Cyanobacteriota
TAA
Leu
>WENV170232689
CEQI01090518
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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