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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170232660
CEQI01087070
381441
Cyanobacteriota
GTT
Asn
>WENV170232445
CEQI01061157
46671
Cyanobacteriota
TAA
Leu
>WENV170233096
CEQI01211477
259770
Cyanobacteriota
GGC
Ala
>WENV170232371
CEQI01054348
26565
Cyanobacteriota
TGA
Ser
>WENV170232821
CEQI01100715
261927
Cyanobacteriota
>WENV170232261
CEQI01041462
161770
Cyanobacteriota
TCT
Arg
>WENV170232434
CEQI01059750
161770
Cyanobacteriota
TCT
Arg
>WENV170232545
CEQI01071988
161770
Cyanobacteriota
TCT
Arg
>WENV170232628
CEQI01084834
161770
Cyanobacteriota
TCT
Arg
>WENV170232770
CEQI01098597
161770
Cyanobacteriota
TCT
Arg
>WENV170232595
CEQI01079246
391767
Cyanobacteriota
TAC
Val
>WENV170232689
CEQI01090518
161771
Cyanobacteriota
CAT
Met
>WENV170231882
CEQI01003580
114789
Cyanobacteriota
TAG
Leu
>WENV170232088
CEQI01022883
206160
Cyanobacteriota
CAT
Met
>WENV170232843
CEQI01106876
258998
Cyanobacteriota
CGT
Thr
>WENV170232820
CEQI01100715
279752
Cyanobacteriota
CGC
Ala
>WENV170232796
CEQI01100364
109240
Cyanobacteriota
CAA
Leu
>WENV170232397
CEQI01056932
260659
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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