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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170252883
CEQU01035775
18367
Gammaproteobacteria
GCT
Ser
>WENV170252955
CEQU01040440
263230
Gammaproteobacteria
TTT
Lys
>WENV170253296
CEQU01070541
448854
Gammaproteobacteria
CCC
Gly
>WENV170252963
CEQU01040923
160668
Gammaproteobacteria
CAT
Met
>WENV170252412
CEQU01006197
305458
Gammaproteobacteria
TAC
Val
>WENV170252834
CEQU01032676
221435
Gammaproteobacteria
GGG
Pro
>WENV170252949
CEQU01039801
221435
Gammaproteobacteria
GGG
Pro
>WENV170253957
CEQU01209946
260947
Gammaproteobacteria
TTG
Gln
>WENV170253424
CEQU01085237
105723
Gammaproteobacteria
GAG
Leu
>WENV170254125
CEQU01249187
67355
Gammaproteobacteria
TAA
Leu
>WENV170252958
CEQU01040518
285013
Gammaproteobacteria
GGT
Thr
>WENV170252485
CEQU01010155
172986
Gammaproteobacteria
CCA
Trp
>WENV170252735
CEQU01026607
172986
Gammaproteobacteria
CCA
Trp
>WENV170252827
CEQU01032231
172986
Gammaproteobacteria
CCA
Trp
>WENV170253857
CEQU01164005
325641
Gammaproteobacteria
CCA
Trp
>WENV170252349
CEQU01000750
448070
Gammaproteobacteria
GCA
Cys
>WENV170252956
CEQU01040518
124716
Gammaproteobacteria
GTA
Tyr
>WENV170252900
CEQU01036216
107578
Gammaproteobacteria
GAG
Leu
>WENV170254102
CEQU01245417
189269
Gammaproteobacteria
CGG
Pro
>WENV170252492
CEQU01010625
163448
Gammaproteobacteria
TCT
Arg
>WENV170254015
CEQU01228367
196918
Gammaproteobacteria
CCG
Arg
>WENV170253477
CEQU01091476
195820
Gammaproteobacteria
GTG
His
>WENV170252884
CEQU01035775
214281
Gammaproteobacteria
ACG
Arg
>WENV170252885
CEQU01035775
214281
Gammaproteobacteria
ACG
Arg
>WENV170253364
CEQU01078949
324336
Gammaproteobacteria
GTG
His
>WENV170253124
CEQU01055830
67081
Gammaproteobacteria
CAA
Leu
>WENV170252392
CEQU01004707
161115
Gammaproteobacteria
CCG
Arg
>WENV170252701
CEQU01024433
26256
Gammaproteobacteria
CGA
Ser
>WENV170252762
CEQU01028194
161319
Gammaproteobacteria
>WENV170252378
CEQU01002430
65858
Gammaproteobacteria
CAA
Leu
>WENV170252414
CEQU01006487
479393
Gammaproteobacteria
GCA
Cys
>WENV170252537
CEQU01013407
479393
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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