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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170253082
CEQU01051691
235837
Gammaproteobacteria
GTT
Asn
>WENV170253003
CEQU01043810
277725
Gammaproteobacteria
TAC
Val
>WENV170252955
CEQU01040440
279385
Gammaproteobacteria
TTT
Lys
>WENV170252762
CEQU01028194
147779
Gammaproteobacteria
CAT
Met
>WENV170253704
CEQU01109138
145368
Gammaproteobacteria
CCT
Arg
>WENV170252834
CEQU01032676
160030
Gammaproteobacteria
GGG
Pro
>WENV170252949
CEQU01039801
160030
Gammaproteobacteria
GGG
Pro
>WENV170252391
CEQU01004510
145367
Gammaproteobacteria
GGG
Pro
>WENV170252438
CEQU01007827
185163
Gammaproteobacteria
ACG
Arg
>WENV170252827
CEQU01032231
149036
Gammaproteobacteria
CCA
Trp
>WENV170252735
CEQU01026607
149036
Gammaproteobacteria
CCA
Trp
>WENV170252485
CEQU01010155
149036
Gammaproteobacteria
CCA
Trp
>WENV170253159
CEQU01058372
145261
Gammaproteobacteria
CAT
Met
>WENV170253503
CEQU01093386
16284
Gammaproteobacteria
TGA
Ser
>WENV170252403
CEQU01005687
145369
Gammaproteobacteria
CGG
Pro
>WENV170252349
CEQU01000750
426403
Gammaproteobacteria
GCA
Cys
>WENV170252885
CEQU01035775
199268
Gammaproteobacteria
ACG
Arg
>WENV170252884
CEQU01035775
199268
Gammaproteobacteria
ACG
Arg
>WENV170252816
CEQU01031150
145237
Gammaproteobacteria
CAT
Met
>WENV170252957
CEQU01040518
412476
Gammaproteobacteria
TCC
Gly
>WENV170252794
CEQU01030051
341782
Gammaproteobacteria
TTG
Gln
>WENV170253957
CEQU01209946
241136
Gammaproteobacteria
TTG
Gln
>WENV170252492
CEQU01010625
154796
Gammaproteobacteria
TCT
Arg
>WENV170252695
CEQU01024302
243921
Gammaproteobacteria
TTT
Lys
>WENV170252378
CEQU01002430
59658
Gammaproteobacteria
CAA
Leu
>WENV170253547
CEQU01097441
149037
Gammaproteobacteria
GAC
Val
>WENV170252537
CEQU01013407
411735
Gammaproteobacteria
GCA
Cys
>WENV170252414
CEQU01006487
411735
Gammaproteobacteria
GCA
Cys
>WENV170252963
CEQU01040923
175964
Gammaproteobacteria
CAT
Met
>WENV170253363
CEQU01078949
150297
Gammaproteobacteria
TCT
Arg
>WENV170253354
CEQU01078341
173617
Gammaproteobacteria
GTC
Asp
>WENV170252853
CEQU01033899
173617
Gammaproteobacteria
GTC
Asp
>WENV170252958
CEQU01040518
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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