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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263472
CERC01051495
277731
Bacteroidota
>WENV170263367
CERC01040100
117444
Bacteroidota
GTA
Tyr
>WENV170263699
CERC01066615
24185
Bacteroidota
GGA
Ser
>WENV170263433
CERC01046753
132066
Bacteroidota
CAA
Leu
>WENV170263700
CERC01066615
448526
Bacteroidota
TTG
Gln
>WENV170263592
CERC01060431
236813
Bacteroidota
GTC
Asp
>WENV170262893
CERC01003407
370082
Bacteroidota
GGT
Thr
>WENV170262878
CERC01002763
160350
Bacteroidota
CAT
Met
>WENV170262950
CERC01006926
160350
Bacteroidota
CAT
Met
>WENV170263851
CERC01100006
139505
Bacteroidota
TAC
Val
>WENV170263733
CERC01066869
12157
Bacteroidota
GCT
Ser
>WENV170262879
CERC01002763
160922
Bacteroidota
GTG
His
>WENV170263413
CERC01044482
67292
Bacteroidota
GAG
Leu
>WENV170263701
CERC01066615
258133
Bacteroidota
>WENV170263345
CERC01037496
150855
Bacteroidota
TAC
Val
>WENV170264031
CERC01134314
170035
Bacteroidota
GTT
Asn
>WENV170264020
CERC01133968
237987
Bacteroidota
CAT
Met
>WENV170263346
CERC01037496
139057
Bacteroidota
GAC
Val
>WENV170263734
CERC01066869
144149
Bacteroidota
TGG
Pro
>WENV170263718
CERC01066828
161858
Bacteroidota
GGG
Pro
>WENV170263352
CERC01038300
210921
Bacteroidota
GGC
Ala
>WENV170263706
CERC01066708
152195
Bacteroidota
TAC
Val
>WENV170263524
CERC01054604
310118
Bacteroidota
CCA
Trp
>WENV170263716
CERC01066818
158528
Bacteroidota
>WENV170264008
CERC01133345
407006
Bacteroidota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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