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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263345
CERC01037496
126974
Bacteroidota
TAC
Val
>WENV170263352
CERC01038300
148243
Bacteroidota
GGC
Ala
>WENV170263701
CERC01066615
238765
Bacteroidota
GCC
Gly
>WENV170263592
CERC01060431
179643
Bacteroidota
GTC
Asp
>WENV170263718
CERC01066828
148046
Bacteroidota
GGG
Pro
>WENV170263472
CERC01051495
270933
Bacteroidota
CAT
Met
>WENV170264020
CERC01133968
161616
Bacteroidota
CAT
Met
>WENV170262879
CERC01002763
150103
Bacteroidota
GTG
His
>WENV170263734
CERC01066869
127414
Bacteroidota
TGG
Pro
>WENV170263429
CERC01046460
238764
Bacteroidota
>WENV170263346
CERC01037496
126712
Bacteroidota
GAC
Val
>WENV170262893
CERC01003407
342872
Bacteroidota
GGT
Thr
>WENV170263633
CERC01063296
145555
Bacteroidota
GTC
Asp
>WENV170262917
CERC01004698
240901
Bacteroidota
TTT
Lys
>WENV170263413
CERC01044482
60370
Bacteroidota
GAG
Leu
>WENV170263699
CERC01066615
16286
Bacteroidota
GGA
Ser
>WENV170263714
CERC01066817
240620
Bacteroidota
GCC
Gly
>WENV170262950
CERC01006926
148047
Bacteroidota
CAT
Met
>WENV170262878
CERC01002763
148047
Bacteroidota
CAT
Met
>WENV170263433
CERC01046753
119524
Bacteroidota
CAA
Leu
>WENV170263367
CERC01040100
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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