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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170280039
CERR01085510
373624
Cyanobacteriota
TTG
Gln
>WENV170280412
CERR01124689
237009
Cyanobacteriota
GGC
Ala
>WENV170279941
CERR01074330
267489
Cyanobacteriota
GGC
Ala
>WENV170280186
CERR01103518
267489
Cyanobacteriota
GGC
Ala
>WENV170279357
CERR01014249
145098
Cyanobacteriota
GGG
Pro
>WENV170280150
CERR01097599
305373
Cyanobacteriota
CGC
Ala
>WENV170279514
CERR01028765
339688
Cyanobacteriota
GAC
Val
>WENV170279603
CERR01038812
58999
Cyanobacteriota
CAG
Leu
>WENV170279222
CERR01006155
148812
Cyanobacteriota
CGG
Pro
>WENV170279548
CERR01031728
190971
Cyanobacteriota
GTC
Asp
>WENV170280032
CERR01084720
11030
Cyanobacteriota
GCT
Ser
>WENV170279764
CERR01052252
11030
Cyanobacteriota
GCT
Ser
>WENV170279430
CERR01020130
11030
Cyanobacteriota
GCT
Ser
>WENV170280599
CERR01184591
37223
Cyanobacteriota
TAA
Leu
>WENV170279546
CERR01031559
147238
Cyanobacteriota
CCG
Arg
>WENV170279189
CERR01003752
147238
Cyanobacteriota
CCG
Arg
>WENV170279303
CERR01011366
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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