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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283615
CERU01038782
160199
Alphaproteobacteria
GGG
Pro
>WENV170283742
CERU01102951
448879
Alphaproteobacteria
CTG
Gln
>WENV170283364
CERU01002940
202800
Alphaproteobacteria
ACG
Arg
>WENV170283365
CERU01002942
369984
Alphaproteobacteria
TTG
Gln
>WENV170283455
CERU01014721
448544
Alphaproteobacteria
CTG
Gln
>WENV170283337
CERU01000490
161005
Alphaproteobacteria
GAC
Val
>WENV170283338
CERU01000490
161005
Alphaproteobacteria
GAC
Val
>WENV170283520
CERU01027934
160201
Alphaproteobacteria
TGG
Pro
>WENV170283763
CERU01109235
88964
Alphaproteobacteria
CAA
Leu
>WENV170283348
CERU01001238
125394
Alphaproteobacteria
CAA
Leu
>WENV170283487
CERU01020873
161011
Alphaproteobacteria
ACG
Arg
>WENV170283717
CERU01091505
8431
Alphaproteobacteria
GCT
Ser
>WENV170283582
CERU01037588
26445
Alphaproteobacteria
GGA
Ser
>WENV170283373
CERU01004073
383286
Alphaproteobacteria
GGT
Thr
>WENV170283374
CERU01004074
448545
Alphaproteobacteria
>WENV170283642
CERU01050315
259902
Alphaproteobacteria
GGC
Ala
>WENV170283433
CERU01011438
370458
Alphaproteobacteria
GGT
Thr
>WENV170283362
CERU01002757
160197
Alphaproteobacteria
GTC
Asp
>WENV170283477
CERU01018512
160197
Alphaproteobacteria
GTC
Asp
>WENV170283577
CERU01037170
160197
Alphaproteobacteria
GTC
Asp
>WENV170283380
CERU01005321
406246
Alphaproteobacteria
GCC
Gly
>WENV170283597
CERU01038321
325069
Alphaproteobacteria
TTT
Lys
>WENV170283407
CERU01008418
160575
Alphaproteobacteria
CCT
Arg
>WENV170283382
CERU01005515
238723
Alphaproteobacteria
GTG
His
>WENV170283378
CERU01005052
382308
Alphaproteobacteria
GAA
Phe
>WENV170283482
CERU01019846
105590
Alphaproteobacteria
TAG
Leu
>WENV170283598
CERU01038369
105419
Alphaproteobacteria
TAA
Leu
>WENV170283385
CERU01005612
65064
Alphaproteobacteria
GAG
Leu
>WENV170283423
CERU01010164
12053
Alphaproteobacteria
GCT
Ser
>WENV170283517
CERU01027878
161006
Alphaproteobacteria
TGG
Pro
>WENV170283512
CERU01026010
27338
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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