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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170298014
CESF01035866
158433
Gammaproteobacteria
ACG
Arg
>WENV170298015
CESF01035866
158433
Gammaproteobacteria
ACG
Arg
>WENV170298243
CESF01076312
170011
Gammaproteobacteria
CCG
Arg
>WENV170298157
CESF01056733
67462
Gammaproteobacteria
CAA
Leu
>WENV170298830
CESF01297629
382398
Gammaproteobacteria
CCG
Arg
>WENV170298770
CESF01263378
309075
Gammaproteobacteria
GTT
Asn
>WENV170298479
CESF01125423
49679
Gammaproteobacteria
GGA
Ser
>WENV170297765
CESF01003014
466478
Gammaproteobacteria
GCA
Cys
>WENV170298421
CESF01116465
160240
Gammaproteobacteria
TGG
Pro
>WENV170298322
CESF01090500
161515
Gammaproteobacteria
CCG
Arg
>WENV170297793
CESF01006871
161116
Gammaproteobacteria
GAC
Val
>WENV170298318
CESF01089500
370514
Gammaproteobacteria
CCG
Arg
>WENV170298595
CESF01138832
290898
Gammaproteobacteria
GTG
His
>WENV170298056
CESF01041031
280034
Gammaproteobacteria
TGT
Thr
>WENV170297929
CESF01024123
160859
Gammaproteobacteria
GGG
Pro
>WENV170297803
CESF01007915
259744
Gammaproteobacteria
TAC
Val
>WENV170298742
CESF01235643
65073
Gammaproteobacteria
CAA
Leu
>WENV170298538
CESF01135227
160858
Gammaproteobacteria
CCA
Trp
>WENV170298347
CESF01096472
18561
Gammaproteobacteria
TGA
Ser
>WENV170298688
CESF01195629
105723
Gammaproteobacteria
GAG
Leu
>WENV170297916
CESF01022936
287727
Gammaproteobacteria
TTT
Lys
>WENV170297917
CESF01022936
287727
Gammaproteobacteria
TTT
Lys
>WENV170297825
CESF01012135
408608
Gammaproteobacteria
CCG
Arg
>WENV170298097
CESF01047569
107345
Gammaproteobacteria
GAG
Leu
>WENV170298044
CESF01040416
158349
Gammaproteobacteria
>WENV170297860
CESF01015689
172986
Gammaproteobacteria
CCA
Trp
>WENV170298262
CESF01080468
172986
Gammaproteobacteria
CCA
Trp
>WENV170298828
CESF01296650
412618
Gammaproteobacteria
TTG
Gln
>WENV170297921
CESF01023298
325641
Gammaproteobacteria
CCA
Trp
>WENV170298396
CESF01109690
448070
Gammaproteobacteria
GCA
Cys
>WENV170297802
CESF01007879
263086
Gammaproteobacteria
GTT
Asn
>WENV170298061
CESF01042321
26464
Gammaproteobacteria
GGA
Ser
>WENV170298220
CESF01071452
178533
Gammaproteobacteria
ACG
Arg
>WENV170297885
CESF01019263
259747
Gammaproteobacteria
TGT
Thr
>WENV170298107
CESF01049337
107578
Gammaproteobacteria
GAG
Leu
>WENV170298237
CESF01074755
275659
Gammaproteobacteria
GCC
Gly
>WENV170297855
CESF01015179
323307
Gammaproteobacteria
GGT
Thr
>WENV170298514
CESF01132214
161939
Gammaproteobacteria
GAC
Val
>WENV170298693
CESF01202459
324336
Gammaproteobacteria
GTG
His
>WENV170298387
CESF01107891
272536
Gammaproteobacteria
GGT
Thr
>WENV170297804
CESF01007915
290375
Gammaproteobacteria
TAC
Val
>WENV170298555
CESF01136772
191341
Gammaproteobacteria
CAT
Met
>WENV170298241
CESF01075649
159609
Gammaproteobacteria
ACG
Arg
>WENV170298184
CESF01062584
462237
Gammaproteobacteria
GCA
Cys
>WENV170298383
CESF01107198
159176
Gammaproteobacteria
GAC
Val
>WENV170298384
CESF01107198
159176
Gammaproteobacteria
GAC
Val
>WENV170298450
CESF01119988
65858
Gammaproteobacteria
CAA
Leu
>WENV170298331
CESF01093061
158444
Gammaproteobacteria
GAC
Val
>WENV170297965
CESF01028884
265381
Gammaproteobacteria
GTT
Asn
>WENV170298725
CESF01226965
236600
Gammaproteobacteria
GTC
Asp
>WENV170298869
CESF01308663
64842
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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